Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.94□□□□□ -0.18
S1PR3Q99500 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
S1PR3Q99500 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
S1PR3Q99500 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.94□□□□□ -0.18
S1PR3Q99500 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.94□□□□□ -0.18
S1PR3Q99500 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.94□□□□□ -0.18
S1PR3Q99500 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 AL450487.1-201ENST00000426799 995 ntBASIC13.94□□□□□ -0.18
S1PR3Q99500 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.94□□□□□ -0.18
S1PR3Q99500 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.94□□□□□ -0.18
S1PR3Q99500 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.94□□□□□ -0.18
S1PR3Q99500 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
S1PR3Q99500 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.94□□□□□ -0.18
S1PR3Q99500 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.94□□□□□ -0.18
S1PR3Q99500 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.94□□□□□ -0.18
S1PR3Q99500 REXO1L6P-202ENST00000619970 1078 ntBASIC13.94□□□□□ -0.18
S1PR3Q99500 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.94□□□□□ -0.18
S1PR3Q99500 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.94□□□□□ -0.18
S1PR3Q99500 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.94□□□□□ -0.18
S1PR3Q99500 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.94□□□□□ -0.18
S1PR3Q99500 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.94□□□□□ -0.18
S1PR3Q99500 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
S1PR3Q99500 AL356309.3-201ENST00000624132 1934 ntBASIC13.94□□□□□ -0.18
S1PR3Q99500 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
S1PR3Q99500 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 AL603756.1-201ENST00000606511 2163 ntBASIC13.93□□□□□ -0.18
S1PR3Q99500 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.93□□□□□ -0.18
S1PR3Q99500 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 AC004817.3-201ENST00000602957 2129 ntBASIC13.93□□□□□ -0.18
S1PR3Q99500 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.93□□□□□ -0.18
S1PR3Q99500 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.93□□□□□ -0.18
S1PR3Q99500 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.93□□□□□ -0.18
S1PR3Q99500 SAPCD2P3-201ENST00000455031 850 ntBASIC13.93□□□□□ -0.18
S1PR3Q99500 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.93□□□□□ -0.18
S1PR3Q99500 UNC93B7-201ENST00000509439 705 ntBASIC13.93□□□□□ -0.18
S1PR3Q99500 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.93□□□□□ -0.18
S1PR3Q99500 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 KRT126P-201ENST00000549467 1181 ntBASIC13.93□□□□□ -0.18
S1PR3Q99500 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
S1PR3Q99500 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.93□□□□□ -0.18
S1PR3Q99500 MTDHP3-201ENST00000594186 672 ntBASIC13.93□□□□□ -0.18
S1PR3Q99500 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
S1PR3Q99500 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.93□□□□□ -0.18
S1PR3Q99500 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
S1PR3Q99500 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
S1PR3Q99500 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.93□□□□□ -0.18
S1PR3Q99500 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
S1PR3Q99500 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.93□□□□□ -0.18
S1PR3Q99500 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.93□□□□□ -0.18
S1PR3Q99500 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
S1PR3Q99500 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
S1PR3Q99500 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.92□□□□□ -0.18
S1PR3Q99500 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
S1PR3Q99500 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
S1PR3Q99500 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
S1PR3Q99500 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.92□□□□□ -0.18
S1PR3Q99500 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
S1PR3Q99500 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.92□□□□□ -0.18
S1PR3Q99500 PCDHB19P-201ENST00000570871 2371 ntBASIC13.92□□□□□ -0.18
S1PR3Q99500 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
S1PR3Q99500 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
S1PR3Q99500 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms