Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AL139099.5-201ENST00000635274 300 ntBASIC14.98□□□□□ -0.01
SPENQ96T58 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.98□□□□□ -0.01
SPENQ96T58 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 REXO1L6P-201ENST00000603433 1515 ntBASIC14.98□□□□□ -0.01
SPENQ96T58 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.98□□□□□ -0.01
SPENQ96T58 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.98□□□□□ -0.01
SPENQ96T58 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SPENQ96T58 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.98□□□□□ -0.01
SPENQ96T58 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 UBALD1-205ENST00000590891 2641 ntBASIC14.98□□□□□ -0.01
SPENQ96T58 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.98□□□□□ -0.01
SPENQ96T58 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.98□□□□□ -0.01
SPENQ96T58 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.98□□□□□ -0.01
SPENQ96T58 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.98□□□□□ -0.01
SPENQ96T58 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
SPENQ96T58 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.98□□□□□ -0.01
SPENQ96T58 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.98□□□□□ -0.01
SPENQ96T58 FLJ13224-201ENST00000313737 1514 ntBASIC14.98□□□□□ -0.01
SPENQ96T58 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPENQ96T58 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPENQ96T58 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPENQ96T58 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPENQ96T58 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.97□□□□□ -0.01
SPENQ96T58 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPENQ96T58 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.97□□□□□ -0.01
SPENQ96T58 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPENQ96T58 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.97□□□□□ -0.01
SPENQ96T58 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.97□□□□□ -0.01
SPENQ96T58 AC073592.8-201ENST00000624126 511 ntBASIC14.97□□□□□ -0.01
SPENQ96T58 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPENQ96T58 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.97□□□□□ -0.01
SPENQ96T58 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.97□□□□□ -0.01
SPENQ96T58 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SPENQ96T58 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.97□□□□□ -0.01
SPENQ96T58 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPENQ96T58 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPENQ96T58 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.97□□□□□ -0.01
SPENQ96T58 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.97□□□□□ -0.01
SPENQ96T58 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.97□□□□□ -0.01
SPENQ96T58 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.97□□□□□ -0.01
SPENQ96T58 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.97□□□□□ -0.01
SPENQ96T58 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.97□□□□□ -0.01
SPENQ96T58 MIR4538-201ENST00000581377 78 ntBASIC14.97□□□□□ -0.01
SPENQ96T58 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
SPENQ96T58 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.97□□□□□ -0.01
SPENQ96T58 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SPENQ96T58 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPENQ96T58 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPENQ96T58 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPENQ96T58 AC092552.1-201ENST00000547243 906 ntBASIC14.97□□□□□ -0.01
SPENQ96T58 MIR6775-201ENST00000617557 69 ntBASIC14.97□□□□□ -0.01
SPENQ96T58 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SPENQ96T58 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.97□□□□□ -0.01
SPENQ96T58 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPENQ96T58 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPENQ96T58 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPENQ96T58 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPENQ96T58 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.96□□□□□ -0.01
SPENQ96T58 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SPENQ96T58 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.96□□□□□ -0.01
SPENQ96T58 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.96□□□□□ -0.01
SPENQ96T58 AC022210.1-201ENST00000449856 793 ntBASIC14.96□□□□□ -0.01
SPENQ96T58 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.96□□□□□ -0.01
SPENQ96T58 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SPENQ96T58 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.96□□□□□ -0.01
SPENQ96T58 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.96□□□□□ -0.01
SPENQ96T58 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SPENQ96T58 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPENQ96T58 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.96□□□□□ -0.01
SPENQ96T58 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPENQ96T58 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.96□□□□□ -0.01
SPENQ96T58 AC023310.3-201ENST00000557027 670 ntBASIC14.96□□□□□ -0.01
SPENQ96T58 AC100756.1-201ENST00000562736 682 ntBASIC14.96□□□□□ -0.01
SPENQ96T58 AC138749.3-201ENST00000567691 622 ntBASIC14.96□□□□□ -0.01
SPENQ96T58 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SPENQ96T58 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPENQ96T58 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SPENQ96T58 AC116165.1-201ENST00000611806 668 ntBASIC14.96□□□□□ -0.01
SPENQ96T58 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.96□□□□□ -0.01
SPENQ96T58 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPENQ96T58 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPENQ96T58 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SPENQ96T58 RNF165-205ENST00000588679 2904 ntBASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms