Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 TIMM8BP1-201ENST00000452384 211 ntBASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 AL135744.1-201ENST00000565098 629 ntBASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 AC022145.2-201ENST00000598203 171 ntBASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDK5RAP1Q96SZ6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 KRT8P39-201ENST00000396270 1433 ntBASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK5RAP1Q96SZ6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 PCDHB17P-201ENST00000539533 2393 ntBASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 AL391256.1-201ENST00000443260 1855 ntBASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP1Q96SZ6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms