Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 KRT18P58-201ENST00000527480 1120 ntBASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 PDPK2P-202ENST00000562415 1191 ntBASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CTHRC1Q96CG8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 AL118508.1-201ENST00000613502 2345 ntBASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 AC140658.5-201ENST00000438532 169 ntBASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 AC109635.5-201ENST00000533593 962 ntBASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 AL031055.1-201ENST00000606362 631 ntBASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.55■□□□□ 0.08
CTHRC1Q96CG8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 GPAA1P2-202ENST00000606848 1787 ntBASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 PGAM5P1-201ENST00000518923 814 ntBASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 AL009183.1-201ENST00000603760 355 ntBASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 AC021097.1-201ENST00000607902 574 ntBASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 AL513190.1-201ENST00000621254 727 ntBASIC15.54■□□□□ 0.08
CTHRC1Q96CG8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms