Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 AP001094.4-201ENST00000579008 2176 ntBASIC15.14■□□□□ 0.01
CPNE4Q96A23 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE4Q96A23 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE4Q96A23 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE4Q96A23 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE4Q96A23 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE4Q96A23 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE4Q96A23 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE4Q96A23 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE4Q96A23 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE4Q96A23 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE4Q96A23 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE4Q96A23 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE4Q96A23 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE4Q96A23 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 AC018845.2-201ENST00000568326 409 ntBASIC15.13■□□□□ 0.01
CPNE4Q96A23 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE4Q96A23 AC004877.2-201ENST00000623941 599 ntBASIC15.13■□□□□ 0.01
CPNE4Q96A23 AP001350.2-201ENST00000625104 1094 ntBASIC15.13■□□□□ 0.01
CPNE4Q96A23 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE4Q96A23 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE4Q96A23 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE4Q96A23 BCAR1-209ENST00000546196 1340 ntBASIC15.13■□□□□ 0.01
CPNE4Q96A23 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CPNE4Q96A23 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE4Q96A23 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 AL121761.2-201ENST00000598007 1648 ntBASIC15.12■□□□□ 0.01
CPNE4Q96A23 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 AC092068.3-201ENST00000587894 2016 ntBASIC15.12■□□□□ 0.01
CPNE4Q96A23 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE4Q96A23 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE4Q96A23 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE4Q96A23 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.11■□□□□ 0.01
CPNE4Q96A23 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE4Q96A23 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CPNE4Q96A23 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE4Q96A23 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms