Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SEMA4DQ92854 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SEMA4DQ92854 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.08■□□□□ 0.48
SEMA4DQ92854 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
SEMA4DQ92854 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SEMA4DQ92854 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SEMA4DQ92854 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SEMA4DQ92854 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SEMA4DQ92854 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SEMA4DQ92854 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 KRT8P39-201ENST00000396270 1433 ntBASIC18.07■□□□□ 0.48
SEMA4DQ92854 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.07■□□□□ 0.48
SEMA4DQ92854 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.07■□□□□ 0.48
SEMA4DQ92854 HMGA1P7-201ENST00000406908 502 ntBASIC18.07■□□□□ 0.48
SEMA4DQ92854 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SEMA4DQ92854 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.07■□□□□ 0.48
SEMA4DQ92854 AL513480.1-201ENST00000451731 511 ntBASIC18.07■□□□□ 0.48
SEMA4DQ92854 HLA-J-202ENST00000469281 1241 ntBASIC18.07■□□□□ 0.48
SEMA4DQ92854 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.07■□□□□ 0.48
SEMA4DQ92854 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.07■□□□□ 0.48
SEMA4DQ92854 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
SEMA4DQ92854 AC096734.2-201ENST00000562054 433 ntBASIC18.07■□□□□ 0.48
SEMA4DQ92854 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.07■□□□□ 0.48
SEMA4DQ92854 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.07■□□□□ 0.48
SEMA4DQ92854 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.07■□□□□ 0.48
SEMA4DQ92854 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SEMA4DQ92854 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SEMA4DQ92854 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.07■□□□□ 0.48
SEMA4DQ92854 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SEMA4DQ92854 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SEMA4DQ92854 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.07■□□□□ 0.48
SEMA4DQ92854 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SEMA4DQ92854 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEMA4DQ92854 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.06■□□□□ 0.48
SEMA4DQ92854 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEMA4DQ92854 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SEMA4DQ92854 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
SEMA4DQ92854 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEMA4DQ92854 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEMA4DQ92854 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.06■□□□□ 0.48
SEMA4DQ92854 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEMA4DQ92854 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SEMA4DQ92854 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEMA4DQ92854 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEMA4DQ92854 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEMA4DQ92854 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEMA4DQ92854 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SEMA4DQ92854 HCG4-201ENST00000418983 998 ntBASIC18.06■□□□□ 0.48
SEMA4DQ92854 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.06■□□□□ 0.48
SEMA4DQ92854 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.06■□□□□ 0.48
SEMA4DQ92854 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.06■□□□□ 0.48
SEMA4DQ92854 MIR4515-201ENST00000584082 81 ntBASIC18.06■□□□□ 0.48
SEMA4DQ92854 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.06■□□□□ 0.48
SEMA4DQ92854 PCDHB19P-201ENST00000570871 2371 ntBASIC18.06■□□□□ 0.48
SEMA4DQ92854 AC012569.1-201ENST00000591191 1524 ntBASIC18.06■□□□□ 0.48
SEMA4DQ92854 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.06■□□□□ 0.48
SEMA4DQ92854 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.06■□□□□ 0.48
SEMA4DQ92854 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SEMA4DQ92854 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEMA4DQ92854 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEMA4DQ92854 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEMA4DQ92854 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SEMA4DQ92854 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SEMA4DQ92854 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
SEMA4DQ92854 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SEMA4DQ92854 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SEMA4DQ92854 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
SEMA4DQ92854 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
SEMA4DQ92854 AC005052.1-201ENST00000625181 2492 ntBASIC18.05■□□□□ 0.48
SEMA4DQ92854 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SEMA4DQ92854 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SEMA4DQ92854 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.05■□□□□ 0.48
SEMA4DQ92854 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.05■□□□□ 0.48
SEMA4DQ92854 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.05■□□□□ 0.48
SEMA4DQ92854 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.05■□□□□ 0.48
SEMA4DQ92854 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.05■□□□□ 0.48
SEMA4DQ92854 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SEMA4DQ92854 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.05■□□□□ 0.48
SEMA4DQ92854 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.05■□□□□ 0.48
SEMA4DQ92854 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.05■□□□□ 0.48
SEMA4DQ92854 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.05■□□□□ 0.48
SEMA4DQ92854 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.05■□□□□ 0.48
SEMA4DQ92854 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SEMA4DQ92854 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SEMA4DQ92854 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms