Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.59■□□□□ 0.89
RPGRQ92834 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRQ92834 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRQ92834 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
RPGRQ92834 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.59■□□□□ 0.89
RPGRQ92834 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.59■□□□□ 0.89
RPGRQ92834 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RPGRQ92834 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRQ92834 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RPGRQ92834 FAM220BP-201ENST00000377689 816 ntBASIC20.59■□□□□ 0.89
RPGRQ92834 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.59■□□□□ 0.89
RPGRQ92834 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.59■□□□□ 0.89
RPGRQ92834 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.59■□□□□ 0.89
RPGRQ92834 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.59■□□□□ 0.89
RPGRQ92834 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.59■□□□□ 0.89
RPGRQ92834 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.59■□□□□ 0.89
RPGRQ92834 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.59■□□□□ 0.89
RPGRQ92834 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.59■□□□□ 0.89
RPGRQ92834 AC008738.7-201ENST00000609744 511 ntBASIC20.59■□□□□ 0.89
RPGRQ92834 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RPGRQ92834 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.59■□□□□ 0.89
RPGRQ92834 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRQ92834 AC073439.1-201ENST00000624121 1774 ntBASIC20.59■□□□□ 0.89
RPGRQ92834 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRQ92834 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRQ92834 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RPGRQ92834 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRQ92834 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRQ92834 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRQ92834 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRQ92834 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRQ92834 RNF165-205ENST00000588679 2904 ntBASIC20.58■□□□□ 0.89
RPGRQ92834 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.58■□□□□ 0.89
RPGRQ92834 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.58■□□□□ 0.89
RPGRQ92834 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
RPGRQ92834 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.58■□□□□ 0.89
RPGRQ92834 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
RPGRQ92834 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRQ92834 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRQ92834 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RPGRQ92834 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.58■□□□□ 0.89
RPGRQ92834 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.58■□□□□ 0.89
RPGRQ92834 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRQ92834 AC007274.1-201ENST00000439805 662 ntBASIC20.58■□□□□ 0.89
RPGRQ92834 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.58■□□□□ 0.89
RPGRQ92834 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.58■□□□□ 0.89
RPGRQ92834 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRQ92834 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRQ92834 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.58■□□□□ 0.89
RPGRQ92834 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.58■□□□□ 0.89
RPGRQ92834 AC009407.1-201ENST00000568958 598 ntBASIC20.58■□□□□ 0.89
RPGRQ92834 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.58■□□□□ 0.89
RPGRQ92834 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.58■□□□□ 0.89
RPGRQ92834 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.58■□□□□ 0.89
RPGRQ92834 RN7SL828P-201ENST00000607615 303 ntBASIC20.58■□□□□ 0.89
RPGRQ92834 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRQ92834 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPGRQ92834 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
RPGRQ92834 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPGRQ92834 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPGRQ92834 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPGRQ92834 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
RPGRQ92834 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRQ92834 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.57■□□□□ 0.88
RPGRQ92834 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RPGRQ92834 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRQ92834 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.57■□□□□ 0.88
RPGRQ92834 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRQ92834 RPL37AP1-201ENST00000412502 279 ntBASIC20.57■□□□□ 0.88
RPGRQ92834 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.57■□□□□ 0.88
RPGRQ92834 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRQ92834 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.57■□□□□ 0.88
RPGRQ92834 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRQ92834 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.57■□□□□ 0.88
RPGRQ92834 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.57■□□□□ 0.88
RPGRQ92834 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRQ92834 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.57■□□□□ 0.88
RPGRQ92834 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.57■□□□□ 0.88
RPGRQ92834 AL359881.2-201ENST00000602973 570 ntBASIC20.57■□□□□ 0.88
RPGRQ92834 AL844908.2-201ENST00000609461 460 ntBASIC20.57■□□□□ 0.88
RPGRQ92834 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.57■□□□□ 0.88
RPGRQ92834 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
RPGRQ92834 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRQ92834 CU639417.3-201ENST00000624240 1404 ntBASIC20.57■□□□□ 0.88
RPGRQ92834 AC090340.1-201ENST00000620778 4980 ntBASIC20.57■□□□□ 0.88
RPGRQ92834 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRQ92834 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RPGRQ92834 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRQ92834 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RPGRQ92834 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRQ92834 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRQ92834 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRQ92834 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.56■□□□□ 0.88
RPGRQ92834 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRQ92834 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RPGRQ92834 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RPGRQ92834 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRQ92834 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.56■□□□□ 0.88
RPGRQ92834 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.56■□□□□ 0.88
RPGRQ92834 RNA5SP410-201ENST00000516285 106 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms