Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
ARHGEF40Q8TER5 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC24.46■■□□□ 1.51
ARHGEF40Q8TER5 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
ARHGEF40Q8TER5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC24.46■■□□□ 1.51
ARHGEF40Q8TER5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ARHGEF40Q8TER5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ARHGEF40Q8TER5 HNRNPA1P48-201ENST00000562726 1377 ntBASIC24.46■■□□□ 1.51
ARHGEF40Q8TER5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ARHGEF40Q8TER5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ARHGEF40Q8TER5 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
ARHGEF40Q8TER5 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ARHGEF40Q8TER5 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC24.45■■□□□ 1.51
ARHGEF40Q8TER5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC24.45■■□□□ 1.51
ARHGEF40Q8TER5 KRT90P-201ENST00000549264 1064 ntBASIC24.45■■□□□ 1.51
ARHGEF40Q8TER5 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC24.45■■□□□ 1.51
ARHGEF40Q8TER5 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC24.45■■□□□ 1.51
ARHGEF40Q8TER5 CU634019.7-201ENST00000624153 1185 ntBASIC24.45■■□□□ 1.51
ARHGEF40Q8TER5 FP236241.2-201ENST00000624906 1185 ntBASIC24.45■■□□□ 1.51
ARHGEF40Q8TER5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC24.45■■□□□ 1.51
ARHGEF40Q8TER5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC24.45■■□□□ 1.51
ARHGEF40Q8TER5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
ARHGEF40Q8TER5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
ARHGEF40Q8TER5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
ARHGEF40Q8TER5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC24.45■■□□□ 1.51
ARHGEF40Q8TER5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC24.45■■□□□ 1.51
ARHGEF40Q8TER5 PC-204ENST00000524491 1714 ntTSL 2 BASIC24.45■■□□□ 1.51
ARHGEF40Q8TER5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC24.45■■□□□ 1.51
ARHGEF40Q8TER5 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 AP000974.1-201ENST00000623909 2387 ntBASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 RPL28-203ENST00000428193 573 ntTSL 2 BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 AC104596.2-201ENST00000512793 793 ntBASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 RPL28-207ENST00000558815 616 ntTSL 2 BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 AC124283.3-201ENST00000570869 594 ntBASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ARHGEF40Q8TER5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 FXNP2-201ENST00000411625 547 ntBASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 CALR4P-201ENST00000431943 946 ntBASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 OLR1-203ENST00000432556 950 ntTSL 2 BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ARHGEF40Q8TER5 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 RPL13AP20-201ENST00000459725 609 ntBASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 DUX4L45-201ENST00000566406 1057 ntBASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 AC133963.1-201ENST00000504166 1679 ntBASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ARHGEF40Q8TER5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC24.42■■□□□ 1.5
ARHGEF40Q8TER5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms