Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 AC104187.1-201ENST00000607510 612 ntBASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 AC006058.4-201ENST00000624016 1670 ntBASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SPTSSBQ8NFR3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 AC008764.7-201ENST00000593779 1081 ntBASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 AL356585.2-201ENST00000625078 2396 ntBASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 GMCL1P1-201ENST00000463439 1581 ntBASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC9.24□□□□□ -0.93
SPTSSBQ8NFR3 ORAI2-210ENST00000611770 10679 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms