Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUP43Q8NFH3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUP43Q8NFH3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
NUP43Q8NFH3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.77■□□□□ 0.12
NUP43Q8NFH3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.77■□□□□ 0.12
NUP43Q8NFH3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUP43Q8NFH3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUP43Q8NFH3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.77■□□□□ 0.12
NUP43Q8NFH3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NUP43Q8NFH3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
NUP43Q8NFH3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUP43Q8NFH3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NUP43Q8NFH3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.77■□□□□ 0.12
NUP43Q8NFH3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.77■□□□□ 0.12
NUP43Q8NFH3 AC012640.2-201ENST00000561606 901 ntBASIC15.77■□□□□ 0.12
NUP43Q8NFH3 AL356488.2-201ENST00000602755 427 ntBASIC15.77■□□□□ 0.12
NUP43Q8NFH3 AL031008.1-201ENST00000619963 541 ntBASIC15.77■□□□□ 0.12
NUP43Q8NFH3 AC148477.8-201ENST00000624298 468 ntBASIC15.77■□□□□ 0.12
NUP43Q8NFH3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUP43Q8NFH3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
NUP43Q8NFH3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
NUP43Q8NFH3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.77■□□□□ 0.11
NUP43Q8NFH3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NUP43Q8NFH3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NUP43Q8NFH3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NUP43Q8NFH3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NUP43Q8NFH3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NUP43Q8NFH3 AP002414.3-201ENST00000589352 1468 ntBASIC15.77■□□□□ 0.11
NUP43Q8NFH3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
NUP43Q8NFH3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
NUP43Q8NFH3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.77■□□□□ 0.11
NUP43Q8NFH3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 AC006538.1-201ENST00000567905 1585 ntBASIC15.76■□□□□ 0.11
NUP43Q8NFH3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 FAAHP1-202ENST00000446499 1238 ntBASIC15.76■□□□□ 0.11
NUP43Q8NFH3 HLA-J-202ENST00000469281 1241 ntBASIC15.76■□□□□ 0.11
NUP43Q8NFH3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 KRT126P-201ENST00000549467 1181 ntBASIC15.76■□□□□ 0.11
NUP43Q8NFH3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 MPDU1-223ENST00000582151 728 ntBASIC15.76■□□□□ 0.11
NUP43Q8NFH3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 AC008667.4-201ENST00000607370 168 ntBASIC15.76■□□□□ 0.11
NUP43Q8NFH3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 AC005593.1-201ENST00000624894 515 ntBASIC15.76■□□□□ 0.11
NUP43Q8NFH3 PGM5P2-202ENST00000637225 1043 ntBASIC15.76■□□□□ 0.11
NUP43Q8NFH3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NUP43Q8NFH3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 PCDHB19P-201ENST00000570871 2371 ntBASIC15.75■□□□□ 0.11
NUP43Q8NFH3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.75■□□□□ 0.11
NUP43Q8NFH3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms