Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 AL645728.1-201ENST00000366221 2101 ntBASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 AL031133.1-201ENST00000406807 723 ntBASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 AL391256.1-201ENST00000443260 1855 ntBASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 AC105917.1-201ENST00000506637 2539 ntBASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
DNAAF1Q8NEP3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 AC011467.2-201ENST00000598425 242 ntBASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNAAF1Q8NEP3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms