Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 AC106886.4-201ENST00000623557 2502 ntBASIC15.99■□□□□ 0.15
PSD4Q8NDX1 AP002414.3-201ENST00000589352 1468 ntBASIC15.99■□□□□ 0.15
PSD4Q8NDX1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 MIR1199-201ENST00000621445 119 ntBASIC15.99■□□□□ 0.15
PSD4Q8NDX1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 NCF1C-201ENST00000438382 1427 ntBASIC15.99■□□□□ 0.15
PSD4Q8NDX1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PSD4Q8NDX1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 MIR574-201ENST00000385209 96 ntBASIC15.98■□□□□ 0.15
PSD4Q8NDX1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 AL671883.3-201ENST00000603274 991 ntBASIC15.98■□□□□ 0.15
PSD4Q8NDX1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PSD4Q8NDX1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PSD4Q8NDX1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PSD4Q8NDX1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PSD4Q8NDX1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PSD4Q8NDX1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.97■□□□□ 0.15
PSD4Q8NDX1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PSD4Q8NDX1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PSD4Q8NDX1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PSD4Q8NDX1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.97■□□□□ 0.15
PSD4Q8NDX1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.97■□□□□ 0.15
PSD4Q8NDX1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PSD4Q8NDX1 AC104109.2-201ENST00000602919 1418 ntBASIC15.97■□□□□ 0.15
PSD4Q8NDX1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PSD4Q8NDX1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PSD4Q8NDX1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PSD4Q8NDX1 KRT18P27-201ENST00000427733 1299 ntBASIC15.97■□□□□ 0.15
PSD4Q8NDX1 KRT18P58-201ENST00000527480 1120 ntBASIC15.97■□□□□ 0.15
PSD4Q8NDX1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms