Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.93■□□□□ 0.94
CARMIL3Q8ND23 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.93■□□□□ 0.94
CARMIL3Q8ND23 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CARMIL3Q8ND23 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CARMIL3Q8ND23 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.93■□□□□ 0.94
CARMIL3Q8ND23 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 FRMD8P1-201ENST00000440433 1524 ntBASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 CU639417.3-201ENST00000624240 1404 ntBASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 AL353705.2-201ENST00000428243 662 ntBASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 AC004840.1-201ENST00000636359 365 ntBASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 AC016396.2-201ENST00000562575 1417 ntBASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CARMIL3Q8ND23 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 HILS1-202ENST00000545329 423 ntBASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CARMIL3Q8ND23 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 KRT17P7-201ENST00000451704 1104 ntBASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 IGHV3-72-202ENST00000621503 303 ntBASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CARMIL3Q8ND23 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.89■□□□□ 0.94
CARMIL3Q8ND23 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CARMIL3Q8ND23 FAM220BP-201ENST00000377689 816 ntBASIC20.89■□□□□ 0.93
CARMIL3Q8ND23 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms