Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AD000864.1-201ENST00000624076 2295 ntBASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 KRT18P13-201ENST00000400056 1290 ntBASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 GPX1P2-201ENST00000429271 606 ntBASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 FAM58CP-201ENST00000435741 640 ntBASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 MIR3687-2-201ENST00000577708 61 ntBASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 AC021097.1-201ENST00000607902 574 ntBASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 MIR3687-1-201ENST00000614492 61 ntBASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 AC091812.2-201ENST00000619081 385 ntBASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 AL671710.1-201ENST00000610245 2349 ntBASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRAM1L1Q8N609 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 RPSAP43-201ENST00000402237 625 ntBASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 UPF3AP3-201ENST00000420996 769 ntBASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 AC010327.4-202ENST00000591484 748 ntBASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 AL078644.1-201ENST00000609881 752 ntBASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 RNF216P1-203ENST00000404404 2427 ntBASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAM1L1Q8N609 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAM1L1Q8N609 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAM1L1Q8N609 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TRAM1L1Q8N609 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAM1L1Q8N609 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAM1L1Q8N609 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAM1L1Q8N609 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAM1L1Q8N609 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAM1L1Q8N609 AC106886.4-201ENST00000623557 2502 ntBASIC16.58■□□□□ 0.25
TRAM1L1Q8N609 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 AC092474.2-201ENST00000424288 719 ntBASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 HTR5BP-201ENST00000430851 1154 ntBASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 ACTG1P14-201ENST00000446382 1122 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms