Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ARHGEF39Q8N4T4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ARHGEF39Q8N4T4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
ARHGEF39Q8N4T4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ARHGEF39Q8N4T4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.83■□□□□ 0.13
ARHGEF39Q8N4T4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ARHGEF39Q8N4T4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 AC211486.1-202ENST00000416371 468 ntBASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 AC211476.1-201ENST00000503899 468 ntBASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 AC105339.1-204ENST00000636249 355 ntBASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ARHGEF39Q8N4T4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 AC106820.2-201ENST00000563775 3264 ntBASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 AL671277.1-201ENST00000429656 993 ntBASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 AC243562.1-201ENST00000560672 389 ntBASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 RARRES2P8-201ENST00000566335 367 ntBASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 AP001160.2-201ENST00000596071 487 ntBASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 AC021097.1-201ENST00000607902 574 ntBASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 AL691403.2-201ENST00000618460 490 ntBASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 AL161645.1-201ENST00000622716 1255 ntBASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 AKAP8P1-201ENST00000434743 1349 ntBASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARHGEF39Q8N4T4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms