Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 AC007541.1-201ENST00000570282 1469 ntBASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 AC022494.1-201ENST00000466044 728 ntBASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 TPRX2P-201ENST00000535362 881 ntBASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 AC106886.1-201ENST00000568660 600 ntBASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 AL033527.4-201ENST00000641026 673 ntBASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
COL27A1Q8IZC6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.58■□□□□ 0.09
COL27A1Q8IZC6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL27A1Q8IZC6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.58■□□□□ 0.09
COL27A1Q8IZC6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.58■□□□□ 0.09
COL27A1Q8IZC6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL27A1Q8IZC6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.58■□□□□ 0.09
COL27A1Q8IZC6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
COL27A1Q8IZC6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 AC067852.2-201ENST00000590513 2313 ntBASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 TTTY23B-201ENST00000442790 549 ntBASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 ELK1P1-201ENST00000485699 580 ntBASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 AL606495.2-201ENST00000605867 535 ntBASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.58■□□□□ 0.08
COL27A1Q8IZC6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms