Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC005829.1-201ENST00000570002 483 ntBASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 AC141586.5-201ENST00000624546 2050 ntBASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 AL078644.1-201ENST00000609881 752 ntBASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 ACTL9-202ENST00000612068 1252 ntBASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 C20orf181-201ENST00000623918 480 ntBASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 AC079781.4-201ENST00000641908 219 ntBASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM48Q8IWZ4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 AC080080.1-201ENST00000625121 2420 ntBASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRIM48Q8IWZ4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 AL021920.2-201ENST00000624828 1351 ntBASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms