Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 AC004461.1-201ENST00000412461 403 ntBASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 SPDYE11-202ENST00000450699 704 ntBASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 AP000344.2-201ENST00000512987 629 ntBASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 SPDYE9P-201ENST00000570642 692 ntBASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 AL031055.1-201ENST00000606362 631 ntBASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 AC026120.1-201ENST00000611536 926 ntBASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 SPDYE10P-202ENST00000612005 668 ntBASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 SPDYE8P-202ENST00000612377 668 ntBASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 AL513210.1-201ENST00000629608 234 ntBASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 AC108860.2-201ENST00000562760 2183 ntBASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 PMS2P2-201ENST00000425039 1128 ntBASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 CYP2A7P1-201ENST00000595391 815 ntBASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 AC022145.2-201ENST00000598203 171 ntBASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 AC004835.2-201ENST00000603762 682 ntBASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 AL161645.1-201ENST00000622716 1255 ntBASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 AL121761.2-201ENST00000598007 1648 ntBASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN4BQ8IWT1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 RNU1-129P-201ENST00000384064 167 ntBASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 TFAMP1-201ENST00000412727 736 ntBASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 ADH5P3-201ENST00000433842 1137 ntBASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 KRT8P48-201ENST00000515599 1220 ntBASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 FAM86C2P-203ENST00000528684 1004 ntBASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 U1.21-201ENST00000580816 167 ntBASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 AL645608.8-201ENST00000606034 2086 ntBASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN4BQ8IWT1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms