Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
CCDC71Q8IV32 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC71Q8IV32 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC71Q8IV32 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC71Q8IV32 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC71Q8IV32 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC71Q8IV32 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC71Q8IV32 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC71Q8IV32 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CCDC71Q8IV32 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.83■□□□□ 0.13
CCDC71Q8IV32 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 AC098831.1-202ENST00000438821 336 ntBASIC15.83■□□□□ 0.12
CCDC71Q8IV32 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 AC103702.1-201ENST00000548801 2630 ntBASIC15.83■□□□□ 0.12
CCDC71Q8IV32 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC71Q8IV32 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 IGHV3-22-201ENST00000520721 359 ntBASIC15.82■□□□□ 0.12
CCDC71Q8IV32 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 AC124947.2-201ENST00000547118 1133 ntBASIC15.82■□□□□ 0.12
CCDC71Q8IV32 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 NKAPP1-205ENST00000585790 367 ntBASIC15.82■□□□□ 0.12
CCDC71Q8IV32 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 AC025062.2-201ENST00000605477 670 ntBASIC15.82■□□□□ 0.12
CCDC71Q8IV32 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC71Q8IV32 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC71Q8IV32 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms