Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 AL391256.1-201ENST00000443260 1855 ntBASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 DRAXINP1-201ENST00000437611 948 ntBASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 AC111152.3-201ENST00000569699 673 ntBASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.89■□□□□ 0.29
CRLF3Q8IUI8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 AC105917.1-201ENST00000506637 2539 ntBASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 TOB2P1-201ENST00000469761 992 ntBASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 AP000867.3-201ENST00000524675 377 ntBASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRLF3Q8IUI8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 GPR89P-201ENST00000407924 1495 ntBASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CRLF3Q8IUI8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms