Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX6Q8HWS3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 LINC00895-201ENST00000629028 1637 ntBASIC17.54■□□□□ 0.4
RFX6Q8HWS3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 PTCHD3P3-201ENST00000403073 906 ntBASIC17.54■□□□□ 0.4
RFX6Q8HWS3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 KRT18P56-201ENST00000507275 550 ntBASIC17.54■□□□□ 0.4
RFX6Q8HWS3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.54■□□□□ 0.4
RFX6Q8HWS3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
RFX6Q8HWS3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 ELK2BP-201ENST00000415014 1224 ntBASIC17.53■□□□□ 0.4
RFX6Q8HWS3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 AC006504.4-201ENST00000592118 1568 ntBASIC17.53■□□□□ 0.4
RFX6Q8HWS3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFX6Q8HWS3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RFX6Q8HWS3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
RFX6Q8HWS3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.52■□□□□ 0.4
RFX6Q8HWS3 PI4KAP1-204ENST00000612579 1703 ntBASIC17.52■□□□□ 0.4
RFX6Q8HWS3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFX6Q8HWS3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFX6Q8HWS3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
RFX6Q8HWS3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RFX6Q8HWS3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFX6Q8HWS3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms