Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
UBE3BQ7Z3V4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
UBE3BQ7Z3V4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
UBE3BQ7Z3V4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
UBE3BQ7Z3V4 AC012313.1-201ENST00000593393 3059 ntBASIC20.89■□□□□ 0.94
UBE3BQ7Z3V4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
UBE3BQ7Z3V4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 AC084121.4-201ENST00000641598 221 ntBASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 AF228730.8-201ENST00000642140 221 ntBASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBE3BQ7Z3V4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 AP000842.3-202ENST00000569238 1080 ntBASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 AL391256.1-201ENST00000443260 1855 ntBASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.88■□□□□ 0.93
UBE3BQ7Z3V4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 AC026471.1-201ENST00000564629 3026 ntBASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
UBE3BQ7Z3V4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms