Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 MIR940-201ENST00000401276 94 ntBASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 AL591424.1-201ENST00000442569 1213 ntBASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 FAM185BP-201ENST00000443595 716 ntBASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 KRT18P2-201ENST00000447938 1258 ntBASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.93■□□□□ 0.3
LYSMD3Q7Z3D4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 POLD2P1-201ENST00000511220 997 ntBASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 AC018845.2-201ENST00000568326 409 ntBASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 FAM197Y3-203ENST00000618346 717 ntBASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 RNF216P1-203ENST00000404404 2427 ntBASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD3Q7Z3D4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 SLC22A20-204ENST00000530038 1673 ntBASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD3Q7Z3D4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms