Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 AC005104.2-201ENST00000427818 678 ntBASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 MIR3180-5-201ENST00000583743 153 ntBASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 KRT8P7-201ENST00000533003 1432 ntBASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
KCNIP4Q6PIL6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 ALOX12P2-203ENST00000570921 1945 ntBASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 KRT16P1-201ENST00000399124 1418 ntBASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 NIFKP9-201ENST00000419265 221 ntBASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 KSR1P1-201ENST00000446298 240 ntBASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 HOXB1-202ENST00000577092 1414 ntBASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 AC233263.1-201ENST00000578059 224 ntBASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 AC008622.2-201ENST00000617006 1229 ntBASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KCNIP4Q6PIL6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
KCNIP4Q6PIL6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
KCNIP4Q6PIL6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
KCNIP4Q6PIL6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.08□□□□□ -0.31
KCNIP4Q6PIL6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
KCNIP4Q6PIL6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.08□□□□□ -0.31
KCNIP4Q6PIL6 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
KCNIP4Q6PIL6 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
KCNIP4Q6PIL6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms