Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
C11orf88Q6PI97 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 DDX43P3-201ENST00000441064 443 ntBASIC14.77□□□□□ -0.05
C11orf88Q6PI97 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 SEC1P-202ENST00000473944 940 ntBASIC14.77□□□□□ -0.05
C11orf88Q6PI97 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 KRT126P-201ENST00000549467 1181 ntBASIC14.77□□□□□ -0.05
C11orf88Q6PI97 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 AC083849.1-201ENST00000615227 514 ntBASIC14.77□□□□□ -0.05
C11orf88Q6PI97 AC093458.2-201ENST00000623150 629 ntBASIC14.77□□□□□ -0.05
C11orf88Q6PI97 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 AC105917.1-201ENST00000506637 2539 ntBASIC14.77□□□□□ -0.05
C11orf88Q6PI97 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 AC092850.2-201ENST00000623821 2697 ntBASIC14.77□□□□□ -0.05
C11orf88Q6PI97 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.77□□□□□ -0.05
C11orf88Q6PI97 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 HCG4P8-203ENST00000443049 980 ntBASIC14.76□□□□□ -0.05
C11orf88Q6PI97 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 AC104390.1-201ENST00000555663 520 ntBASIC14.76□□□□□ -0.05
C11orf88Q6PI97 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 HYMAI.1-201ENST00000620949 238 ntBASIC14.76□□□□□ -0.05
C11orf88Q6PI97 AL691432.3-201ENST00000621860 400 ntBASIC14.76□□□□□ -0.05
C11orf88Q6PI97 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms