Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.23■□□□□ 0.35
CASC4Q6P4E1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 BX005266.1-201ENST00000473402 457 ntBASIC17.23■□□□□ 0.35
CASC4Q6P4E1 FOSL1P1-201ENST00000511041 816 ntBASIC17.23■□□□□ 0.35
CASC4Q6P4E1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 AC008741.2-201ENST00000612792 3115 ntBASIC17.23■□□□□ 0.35
CASC4Q6P4E1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 DOC2GP-204ENST00000639052 2548 ntBASIC17.23■□□□□ 0.35
CASC4Q6P4E1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 AL391256.1-201ENST00000443260 1855 ntBASIC17.22■□□□□ 0.35
CASC4Q6P4E1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 AP005117.1-201ENST00000584346 1413 ntBASIC17.22■□□□□ 0.35
CASC4Q6P4E1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 AP001269.4-201ENST00000609611 512 ntBASIC17.22■□□□□ 0.35
CASC4Q6P4E1 AC073592.4-201ENST00000623827 446 ntBASIC17.22■□□□□ 0.35
CASC4Q6P4E1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASC4Q6P4E1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 HLA-A-202ENST00000376806 1854 ntBASIC17.21■□□□□ 0.35
CASC4Q6P4E1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.21■□□□□ 0.35
CASC4Q6P4E1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms