Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 AL513480.1-201ENST00000451731 511 ntBASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 PGAM5P1-201ENST00000518923 814 ntBASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 AC087641.1-201ENST00000557561 1021 ntBASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 AC018845.2-201ENST00000568326 409 ntBASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 AC023141.13-201ENST00000604991 943 ntBASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 AC007064.4-201ENST00000637740 555 ntBASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 AL139011.1-202ENST00000642063 584 ntBASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R3AQ6IN85 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 AC004877.2-201ENST00000623941 599 ntBASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 AC078925.2-201ENST00000624013 1973 ntBASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 AC012569.1-201ENST00000591191 1524 ntBASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R3AQ6IN85 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 TNRC18P3-201ENST00000441896 2691 ntBASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 AC106886.4-201ENST00000623557 2502 ntBASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R3AQ6IN85 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms