Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC009533.2-201ENST00000543664 586 ntBASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 AD001527.2-201ENST00000622994 785 ntBASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 AC073592.5-201ENST00000624854 528 ntBASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 RNF152P1-201ENST00000397754 604 ntBASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 AL845331.1-201ENST00000424978 1190 ntBASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 AL137013.1-201ENST00000432946 1228 ntBASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 AL596087.1-201ENST00000400979 1969 ntBASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00242Q5T6M2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms