Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 AC006504.4-201ENST00000592118 1568 ntBASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 AC073621.1-201ENST00000392730 636 ntBASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 AL139424.1-201ENST00000607572 797 ntBASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 AC116407.3-201ENST00000623905 1129 ntBASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
KHDC1Q4VXA5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 ACTG1P4-201ENST00000425123 1122 ntBASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KHDC1Q4VXA5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
KHDC1Q4VXA5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
KHDC1Q4VXA5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KHDC1Q4VXA5 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KHDC1Q4VXA5 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KHDC1Q4VXA5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.08■□□□□ 0.33
KHDC1Q4VXA5 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KHDC1Q4VXA5 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms