Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 AC096734.2-201ENST00000562054 433 ntBASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 AC064836.3-201ENST00000607928 673 ntBASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 KRT8P39-201ENST00000396270 1433 ntBASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
PTPN20Q4JDL3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 AC007967.2-201ENST00000432613 625 ntBASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 RHOQP3-201ENST00000437982 621 ntBASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 AC079328.2-201ENST00000561241 3354 ntBASIC17.68■□□□□ 0.42
PTPN20Q4JDL3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 AC012569.1-201ENST00000591191 1524 ntBASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 KRT18P2-201ENST00000447938 1258 ntBASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 AC106730.1-201ENST00000566722 1090 ntBASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 AC018845.2-201ENST00000568326 409 ntBASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 MIR4515-201ENST00000584082 81 ntBASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN20Q4JDL3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms