Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 AC112482.1-201ENST00000492080 688 ntBASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 AC009533.2-201ENST00000543664 586 ntBASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 KRT8P47-201ENST00000604727 1398 ntBASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 AL513477.1-201ENST00000602865 2407 ntBASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRFAM7AQ494W8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 RPS2P1-201ENST00000434010 821 ntBASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 OR7E14P-202ENST00000530490 1290 ntBASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 AC034105.1-201ENST00000563488 319 ntBASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 AC021087.4-201ENST00000563761 564 ntBASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 AP001269.4-201ENST00000609611 512 ntBASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 AC134684.3-201ENST00000641758 218 ntBASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRFAM7AQ494W8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
CHRFAM7AQ494W8 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms