Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.46■□□□□ 0.71
HERVK_113P62684 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.46■□□□□ 0.71
HERVK_113P62684 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.46■□□□□ 0.71
HERVK_113P62684 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.46■□□□□ 0.71
HERVK_113P62684 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERVK_113P62684 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERVK_113P62684 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HERVK_113P62684 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HERVK_113P62684 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.46■□□□□ 0.71
HERVK_113P62684 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERVK_113P62684 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
HERVK_113P62684 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HERVK_113P62684 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HERVK_113P62684 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 TOP3BP1-201ENST00000420768 1380 ntBASIC19.45■□□□□ 0.7
HERVK_113P62684 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HERVK_113P62684 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 AP001094.4-201ENST00000579008 2176 ntBASIC19.45■□□□□ 0.7
HERVK_113P62684 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 MIR346-201ENST00000362234 95 ntBASIC19.45■□□□□ 0.7
HERVK_113P62684 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HERVK_113P62684 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
HERVK_113P62684 AC005034.1-201ENST00000426657 489 ntBASIC19.45■□□□□ 0.7
HERVK_113P62684 AC069120.2-201ENST00000524091 540 ntBASIC19.45■□□□□ 0.7
HERVK_113P62684 MIR3909-201ENST00000579518 119 ntBASIC19.45■□□□□ 0.7
HERVK_113P62684 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.45■□□□□ 0.7
HERVK_113P62684 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.45■□□□□ 0.7
HERVK_113P62684 AL035252.4-201ENST00000624174 288 ntBASIC19.45■□□□□ 0.7
HERVK_113P62684 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
HERVK_113P62684 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HERVK_113P62684 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
HERVK_113P62684 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.45■□□□□ 0.7
HERVK_113P62684 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HERVK_113P62684 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HERVK_113P62684 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERVK_113P62684 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HERVK_113P62684 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.44■□□□□ 0.7
HERVK_113P62684 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.44■□□□□ 0.7
HERVK_113P62684 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.44■□□□□ 0.7
HERVK_113P62684 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.44■□□□□ 0.7
HERVK_113P62684 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.44■□□□□ 0.7
HERVK_113P62684 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.44■□□□□ 0.7
HERVK_113P62684 FAM207CP-201ENST00000443486 507 ntBASIC19.44■□□□□ 0.7
HERVK_113P62684 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.44■□□□□ 0.7
HERVK_113P62684 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.44■□□□□ 0.7
HERVK_113P62684 AC097493.3-201ENST00000509725 367 ntBASIC19.44■□□□□ 0.7
HERVK_113P62684 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.44■□□□□ 0.7
HERVK_113P62684 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.44■□□□□ 0.7
HERVK_113P62684 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 AC008761.3-201ENST00000624803 892 ntBASIC19.44■□□□□ 0.7
HERVK_113P62684 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.44■□□□□ 0.7
HERVK_113P62684 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.44■□□□□ 0.7
HERVK_113P62684 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.44■□□□□ 0.7
HERVK_113P62684 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HERVK_113P62684 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERVK_113P62684 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.44■□□□□ 0.7
HERVK_113P62684 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HERVK_113P62684 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.44■□□□□ 0.7
HERVK_113P62684 EGFEM1P-202ENST00000431685 1563 ntBASIC19.44■□□□□ 0.7
HERVK_113P62684 AD000864.1-201ENST00000624076 2295 ntBASIC19.44■□□□□ 0.7
HERVK_113P62684 AL023806.1-201ENST00000603994 1649 ntBASIC19.43■□□□□ 0.7
HERVK_113P62684 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERVK_113P62684 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERVK_113P62684 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HERVK_113P62684 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERVK_113P62684 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERVK_113P62684 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HERVK_113P62684 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms