Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CLDN20P56880 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN20P56880 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.49■□□□□ 0.07
CLDN20P56880 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CLDN20P56880 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN20P56880 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 AC145285.3-201ENST00000564603 959 ntBASIC15.49■□□□□ 0.07
CLDN20P56880 AC106730.1-201ENST00000566722 1090 ntBASIC15.49■□□□□ 0.07
CLDN20P56880 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 Z83851.2-201ENST00000609564 659 ntBASIC15.49■□□□□ 0.07
CLDN20P56880 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.49■□□□□ 0.07
CLDN20P56880 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.49■□□□□ 0.07
CLDN20P56880 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CLDN20P56880 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CLDN20P56880 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN20P56880 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN20P56880 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CLDN20P56880 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN20P56880 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLDN20P56880 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CLDN20P56880 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.48■□□□□ 0.07
CLDN20P56880 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.48■□□□□ 0.07
CLDN20P56880 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLDN20P56880 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLDN20P56880 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.48■□□□□ 0.07
CLDN20P56880 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CLDN20P56880 AC009947.1-201ENST00000444350 727 ntBASIC15.48■□□□□ 0.07
CLDN20P56880 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CLDN20P56880 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN20P56880 AC034105.1-201ENST00000563488 319 ntBASIC15.48■□□□□ 0.07
CLDN20P56880 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN20P56880 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CLDN20P56880 AL805961.1-202ENST00000641562 540 ntBASIC15.48■□□□□ 0.07
CLDN20P56880 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 AC016396.2-201ENST00000562575 1417 ntBASIC15.48■□□□□ 0.07
CLDN20P56880 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLDN20P56880 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN20P56880 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
CLDN20P56880 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN20P56880 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CLDN20P56880 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN20P56880 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN20P56880 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN20P56880 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDN20P56880 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.47■□□□□ 0.07
CLDN20P56880 AC108751.1-201ENST00000490852 363 ntBASIC15.47■□□□□ 0.07
CLDN20P56880 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN20P56880 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CLDN20P56880 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN20P56880 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.47■□□□□ 0.07
CLDN20P56880 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDN20P56880 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CLDN20P56880 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms