Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CLDN6P56747 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLDN6P56747 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN6P56747 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN6P56747 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN6P56747 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN6P56747 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN6P56747 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CLDN6P56747 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN6P56747 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN6P56747 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN6P56747 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN6P56747 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN6P56747 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN6P56747 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN6P56747 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN6P56747 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLDN6P56747 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN6P56747 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN6P56747 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN6P56747 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
CLDN6P56747 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN6P56747 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.12■□□□□ 0.17
CLDN6P56747 AL138828.2-201ENST00000615812 383 ntBASIC16.12■□□□□ 0.17
CLDN6P56747 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN6P56747 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN6P56747 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CLDN6P56747 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN6P56747 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN6P56747 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CLDN6P56747 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CLDN6P56747 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CLDN6P56747 AL353732.1-201ENST00000569618 1459 ntBASIC16.11■□□□□ 0.17
CLDN6P56747 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CLDN6P56747 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN6P56747 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.11■□□□□ 0.17
CLDN6P56747 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CLDN6P56747 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN6P56747 AC027307.3-201ENST00000594262 1100 ntBASIC16.11■□□□□ 0.17
CLDN6P56747 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN6P56747 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN6P56747 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CLDN6P56747 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN6P56747 AC022144.1-201ENST00000602255 1580 ntBASIC16.11■□□□□ 0.17
CLDN6P56747 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN6P56747 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN6P56747 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN6P56747 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CLDN6P56747 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
CLDN6P56747 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN6P56747 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN6P56747 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CLDN6P56747 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
CLDN6P56747 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN6P56747 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CLDN6P56747 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CLDN6P56747 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CLDN6P56747 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CLDN6P56747 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN6P56747 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN6P56747 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.1■□□□□ 0.17
CLDN6P56747 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CLDN6P56747 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN6P56747 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN6P56747 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN6P56747 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN6P56747 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN6P56747 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN6P56747 AL359881.2-201ENST00000602973 570 ntBASIC16.1■□□□□ 0.17
CLDN6P56747 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms