Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1LP55160 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1LP55160 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.38■□□□□ 0.53
NCKAP1LP55160 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1LP55160 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1LP55160 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NCKAP1LP55160 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.38■□□□□ 0.53
NCKAP1LP55160 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1LP55160 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.38■□□□□ 0.53
NCKAP1LP55160 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.38■□□□□ 0.53
NCKAP1LP55160 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.38■□□□□ 0.53
NCKAP1LP55160 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.38■□□□□ 0.53
NCKAP1LP55160 AC091812.2-201ENST00000619081 385 ntBASIC18.38■□□□□ 0.53
NCKAP1LP55160 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.38■□□□□ 0.53
NCKAP1LP55160 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.38■□□□□ 0.53
NCKAP1LP55160 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1LP55160 AC011676.5-201ENST00000624864 2660 ntBASIC18.38■□□□□ 0.53
NCKAP1LP55160 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.38■□□□□ 0.53
NCKAP1LP55160 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1LP55160 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1LP55160 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
NCKAP1LP55160 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NCKAP1LP55160 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1LP55160 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.38■□□□□ 0.53
NCKAP1LP55160 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.38■□□□□ 0.53
NCKAP1LP55160 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.38■□□□□ 0.53
NCKAP1LP55160 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCKAP1LP55160 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NCKAP1LP55160 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCKAP1LP55160 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 AC009053.2-201ENST00000563701 2365 ntBASIC18.37■□□□□ 0.53
NCKAP1LP55160 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 AC092474.2-201ENST00000424288 719 ntBASIC18.37■□□□□ 0.53
NCKAP1LP55160 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 DNAJB3-201ENST00000446806 729 ntBASIC18.37■□□□□ 0.53
NCKAP1LP55160 ALG1L5P-201ENST00000482043 771 ntBASIC18.37■□□□□ 0.53
NCKAP1LP55160 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 AC099522.2-201ENST00000607001 744 ntBASIC18.37■□□□□ 0.53
NCKAP1LP55160 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 C20orf181-201ENST00000623918 480 ntBASIC18.37■□□□□ 0.53
NCKAP1LP55160 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCKAP1LP55160 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCKAP1LP55160 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.37■□□□□ 0.53
NCKAP1LP55160 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCKAP1LP55160 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 AC002056.1-201ENST00000395613 760 ntBASIC18.36■□□□□ 0.53
NCKAP1LP55160 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 AC112191.1-201ENST00000523689 701 ntBASIC18.36■□□□□ 0.53
NCKAP1LP55160 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.36■□□□□ 0.53
NCKAP1LP55160 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1LP55160 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms