Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC004877.2-201ENST00000623941 599 ntBASIC18.05■□□□□ 0.48
VCPP55072 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCPP55072 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCPP55072 AC124067.4-201ENST00000519691 2379 ntBASIC18.05■□□□□ 0.48
VCPP55072 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCPP55072 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCPP55072 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCPP55072 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.05■□□□□ 0.48
VCPP55072 AC106886.4-201ENST00000623557 2502 ntBASIC18.05■□□□□ 0.48
VCPP55072 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.05■□□□□ 0.48
VCPP55072 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
VCPP55072 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCPP55072 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCPP55072 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VCPP55072 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCPP55072 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCPP55072 AC046185.3-201ENST00000623228 1824 ntBASIC18.05■□□□□ 0.48
VCPP55072 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCPP55072 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.04■□□□□ 0.48
VCPP55072 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
VCPP55072 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 MYCLP1-201ENST00000372451 1075 ntBASIC18.04■□□□□ 0.48
VCPP55072 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.04■□□□□ 0.48
VCPP55072 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 FAM86GP-201ENST00000448322 971 ntBASIC18.04■□□□□ 0.48
VCPP55072 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.04■□□□□ 0.48
VCPP55072 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.04■□□□□ 0.48
VCPP55072 AC093214.1-201ENST00000511688 1107 ntBASIC18.04■□□□□ 0.48
VCPP55072 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.04■□□□□ 0.48
VCPP55072 AC087641.1-201ENST00000557561 1021 ntBASIC18.04■□□□□ 0.48
VCPP55072 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
VCPP55072 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.04■□□□□ 0.48
VCPP55072 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
VCPP55072 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.04■□□□□ 0.48
VCPP55072 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
VCPP55072 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.04■□□□□ 0.48
VCPP55072 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
VCPP55072 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.04■□□□□ 0.48
VCPP55072 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.04■□□□□ 0.48
VCPP55072 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.04■□□□□ 0.48
VCPP55072 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCPP55072 LINC02012-201ENST00000608206 1725 ntBASIC18.03■□□□□ 0.48
VCPP55072 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VCPP55072 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.03■□□□□ 0.48
VCPP55072 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCPP55072 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.03■□□□□ 0.48
VCPP55072 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VCPP55072 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
VCPP55072 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
VCPP55072 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCPP55072 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VCPP55072 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCPP55072 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.03■□□□□ 0.48
VCPP55072 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
VCPP55072 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCPP55072 ACTG1P14-201ENST00000446382 1122 ntBASIC18.03■□□□□ 0.48
VCPP55072 PRYP5-201ENST00000451909 266 ntBASIC18.03■□□□□ 0.48
VCPP55072 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.03■□□□□ 0.48
VCPP55072 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
VCPP55072 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.03■□□□□ 0.48
VCPP55072 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.03■□□□□ 0.48
VCPP55072 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.03■□□□□ 0.48
VCPP55072 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
VCPP55072 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.03■□□□□ 0.48
VCPP55072 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCPP55072 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VCPP55072 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCPP55072 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
VCPP55072 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.03■□□□□ 0.48
VCPP55072 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.03■□□□□ 0.48
VCPP55072 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
VCPP55072 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCPP55072 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCPP55072 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
VCPP55072 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
VCPP55072 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCPP55072 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
VCPP55072 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCPP55072 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VCPP55072 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
VCPP55072 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
VCPP55072 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.02■□□□□ 0.48
VCPP55072 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VCPP55072 BCAR1-209ENST00000546196 1340 ntBASIC18.02■□□□□ 0.48
VCPP55072 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VCPP55072 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms