Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN2P51788 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCN2P51788 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN2P51788 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.37■□□□□ 0.21
CLCN2P51788 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLCN2P51788 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN2P51788 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
CLCN2P51788 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN2P51788 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CLCN2P51788 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CLCN2P51788 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.37■□□□□ 0.21
CLCN2P51788 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN2P51788 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCN2P51788 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.37■□□□□ 0.21
CLCN2P51788 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN2P51788 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.37■□□□□ 0.21
CLCN2P51788 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN2P51788 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCN2P51788 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN2P51788 FAM197Y8-203ENST00000450145 560 ntBASIC16.37■□□□□ 0.21
CLCN2P51788 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLCN2P51788 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.37■□□□□ 0.21
CLCN2P51788 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN2P51788 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN2P51788 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.37■□□□□ 0.21
CLCN2P51788 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CLCN2P51788 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN2P51788 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CLCN2P51788 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCN2P51788 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN2P51788 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCN2P51788 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN2P51788 AC078925.2-201ENST00000624013 1973 ntBASIC16.37■□□□□ 0.21
CLCN2P51788 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCN2P51788 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCN2P51788 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCN2P51788 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CLCN2P51788 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCN2P51788 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLCN2P51788 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCN2P51788 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CLCN2P51788 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCN2P51788 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CLCN2P51788 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCN2P51788 AC002558.1-201ENST00000488906 803 ntBASIC16.36■□□□□ 0.21
CLCN2P51788 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCN2P51788 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLCN2P51788 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCN2P51788 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCN2P51788 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCN2P51788 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCN2P51788 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCN2P51788 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.36■□□□□ 0.21
CLCN2P51788 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN2P51788 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCN2P51788 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CLCN2P51788 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN2P51788 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN2P51788 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.35■□□□□ 0.21
CLCN2P51788 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN2P51788 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN2P51788 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
CLCN2P51788 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CLCN2P51788 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN2P51788 PMPCAP1-201ENST00000508114 1576 ntBASIC16.35■□□□□ 0.21
CLCN2P51788 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN2P51788 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN2P51788 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms