Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.52■□□□□ 0.56
CDK7P50613 AC008764.6-201ENST00000595909 2069 ntBASIC18.52■□□□□ 0.56
CDK7P50613 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDK7P50613 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDK7P50613 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDK7P50613 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDK7P50613 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.52■□□□□ 0.55
CDK7P50613 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CDK7P50613 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CDK7P50613 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CDK7P50613 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDK7P50613 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDK7P50613 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.51■□□□□ 0.55
CDK7P50613 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK7P50613 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDK7P50613 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDK7P50613 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDK7P50613 PRORSD1P-202ENST00000563365 2154 ntBASIC18.51■□□□□ 0.55
CDK7P50613 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK7P50613 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CDK7P50613 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK7P50613 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.51■□□□□ 0.55
CDK7P50613 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.51■□□□□ 0.55
CDK7P50613 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.51■□□□□ 0.55
CDK7P50613 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK7P50613 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK7P50613 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.51■□□□□ 0.55
CDK7P50613 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.51■□□□□ 0.55
CDK7P50613 ARSEP1-201ENST00000420443 635 ntBASIC18.51■□□□□ 0.55
CDK7P50613 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.51■□□□□ 0.55
CDK7P50613 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.51■□□□□ 0.55
CDK7P50613 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.51■□□□□ 0.55
CDK7P50613 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.51■□□□□ 0.55
CDK7P50613 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.51■□□□□ 0.55
CDK7P50613 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDK7P50613 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.51■□□□□ 0.55
CDK7P50613 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.51■□□□□ 0.55
CDK7P50613 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK7P50613 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
CDK7P50613 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.51■□□□□ 0.55
CDK7P50613 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CDK7P50613 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK7P50613 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK7P50613 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK7P50613 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK7P50613 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.51■□□□□ 0.55
CDK7P50613 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDK7P50613 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.5■□□□□ 0.55
CDK7P50613 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK7P50613 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.5■□□□□ 0.55
CDK7P50613 AC106820.2-201ENST00000563775 3264 ntBASIC18.5■□□□□ 0.55
CDK7P50613 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.5■□□□□ 0.55
CDK7P50613 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK7P50613 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CDK7P50613 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CDK7P50613 FOXO1B-201ENST00000504678 1527 ntBASIC18.5■□□□□ 0.55
CDK7P50613 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CDK7P50613 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDK7P50613 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK7P50613 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.5■□□□□ 0.55
CDK7P50613 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK7P50613 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CDK7P50613 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.5■□□□□ 0.55
CDK7P50613 U91328.1-201ENST00000437528 223 ntBASIC18.5■□□□□ 0.55
CDK7P50613 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.5■□□□□ 0.55
CDK7P50613 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.5■□□□□ 0.55
CDK7P50613 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK7P50613 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK7P50613 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.5■□□□□ 0.55
CDK7P50613 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.5■□□□□ 0.55
CDK7P50613 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK7P50613 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDK7P50613 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDK7P50613 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.5■□□□□ 0.55
CDK7P50613 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.5■□□□□ 0.55
CDK7P50613 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK7P50613 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.5■□□□□ 0.55
CDK7P50613 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK7P50613 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CDK7P50613 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK7P50613 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK7P50613 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.49■□□□□ 0.55
CDK7P50613 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK7P50613 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK7P50613 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CDK7P50613 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.49■□□□□ 0.55
CDK7P50613 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK7P50613 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK7P50613 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK7P50613 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK7P50613 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.49■□□□□ 0.55
CDK7P50613 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.49■□□□□ 0.55
CDK7P50613 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK7P50613 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK7P50613 AC021097.1-201ENST00000607902 574 ntBASIC18.49■□□□□ 0.55
CDK7P50613 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK7P50613 EGFEM1P-202ENST00000431685 1563 ntBASIC18.49■□□□□ 0.55
CDK7P50613 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK7P50613 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK7P50613 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms