Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SLC1A6P48664 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLC1A6P48664 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A6P48664 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A6P48664 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC1A6P48664 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SLC1A6P48664 KRT18P57-201ENST00000443599 1254 ntBASIC16.61■□□□□ 0.25
SLC1A6P48664 AC091607.1-201ENST00000490318 1060 ntBASIC16.61■□□□□ 0.25
SLC1A6P48664 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A6P48664 AC097493.4-201ENST00000641197 219 ntBASIC16.61■□□□□ 0.25
SLC1A6P48664 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A6P48664 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.61■□□□□ 0.25
SLC1A6P48664 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A6P48664 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A6P48664 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A6P48664 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC1A6P48664 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A6P48664 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A6P48664 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A6P48664 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC1A6P48664 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A6P48664 TSPY26P-202ENST00000565928 3884 ntBASIC16.61■□□□□ 0.25
SLC1A6P48664 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A6P48664 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A6P48664 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC1A6P48664 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 AC148477.5-201ENST00000625164 1645 ntBASIC16.6■□□□□ 0.25
SLC1A6P48664 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SLC1A6P48664 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC1A6P48664 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SLC1A6P48664 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC1A6P48664 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SLC1A6P48664 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC1A6P48664 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC1A6P48664 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SLC1A6P48664 SIGLEC30P-201ENST00000455569 941 ntBASIC16.6■□□□□ 0.25
SLC1A6P48664 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 AC011498.5-201ENST00000592027 486 ntBASIC16.6■□□□□ 0.25
SLC1A6P48664 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC1A6P48664 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC1A6P48664 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC1A6P48664 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SLC1A6P48664 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SLC1A6P48664 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SLC1A6P48664 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A6P48664 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC1A6P48664 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
SLC1A6P48664 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC1A6P48664 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 AP002414.1-201ENST00000391405 1147 ntBASIC16.59■□□□□ 0.25
SLC1A6P48664 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 AL671277.2-201ENST00000458060 996 ntBASIC16.59■□□□□ 0.25
SLC1A6P48664 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC1A6P48664 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC1A6P48664 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC1A6P48664 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC1A6P48664 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC1A6P48664 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SLC1A6P48664 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC1A6P48664 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC1A6P48664 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SLC1A6P48664 KRT8P49-201ENST00000604166 1432 ntBASIC16.59■□□□□ 0.25
SLC1A6P48664 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC1A6P48664 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC1A6P48664 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC1A6P48664 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A6P48664 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms