Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC006277.1-201ENST00000624348 1610 ntBASIC20.67■□□□□ 0.9
TM4SF1P30408 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TM4SF1P30408 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF1P30408 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF1P30408 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.66■□□□□ 0.9
TM4SF1P30408 NOC2LP1-202ENST00000452600 2235 ntBASIC20.66■□□□□ 0.9
TM4SF1P30408 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF1P30408 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF1P30408 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF1P30408 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF1P30408 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF1P30408 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.66■□□□□ 0.9
TM4SF1P30408 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.66■□□□□ 0.9
TM4SF1P30408 ELK1P1-201ENST00000485699 580 ntBASIC20.66■□□□□ 0.9
TM4SF1P30408 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.66■□□□□ 0.9
TM4SF1P30408 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF1P30408 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.66■□□□□ 0.9
TM4SF1P30408 AC099568.2-201ENST00000609194 695 ntBASIC20.66■□□□□ 0.9
TM4SF1P30408 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.66■□□□□ 0.9
TM4SF1P30408 AC004461.2-201ENST00000629517 803 ntBASIC20.66■□□□□ 0.9
TM4SF1P30408 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.66■□□□□ 0.9
TM4SF1P30408 AL033527.5-202ENST00000641632 1098 ntBASIC20.66■□□□□ 0.9
TM4SF1P30408 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TM4SF1P30408 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TM4SF1P30408 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.66■□□□□ 0.9
TM4SF1P30408 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.66■□□□□ 0.9
TM4SF1P30408 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF1P30408 AL390961.4-201ENST00000623958 2535 ntBASIC20.66■□□□□ 0.9
TM4SF1P30408 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF1P30408 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF1P30408 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF1P30408 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF1P30408 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TM4SF1P30408 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.65■□□□□ 0.9
TM4SF1P30408 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.65■□□□□ 0.9
TM4SF1P30408 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF1P30408 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TM4SF1P30408 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF1P30408 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TM4SF1P30408 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.65■□□□□ 0.9
TM4SF1P30408 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF1P30408 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF1P30408 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF1P30408 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TM4SF1P30408 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TM4SF1P30408 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.65■□□□□ 0.9
TM4SF1P30408 MYCLP2-201ENST00000449268 967 ntBASIC20.65■□□□□ 0.9
TM4SF1P30408 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.65■□□□□ 0.9
TM4SF1P30408 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.65■□□□□ 0.9
TM4SF1P30408 AC023310.3-201ENST00000557027 670 ntBASIC20.65■□□□□ 0.9
TM4SF1P30408 AC100756.1-201ENST00000562736 682 ntBASIC20.65■□□□□ 0.9
TM4SF1P30408 AC138749.3-201ENST00000567691 622 ntBASIC20.65■□□□□ 0.9
TM4SF1P30408 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.65■□□□□ 0.9
TM4SF1P30408 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.65■□□□□ 0.9
TM4SF1P30408 AC116165.1-201ENST00000611806 668 ntBASIC20.65■□□□□ 0.9
TM4SF1P30408 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.65■□□□□ 0.9
TM4SF1P30408 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF1P30408 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.65■□□□□ 0.9
TM4SF1P30408 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.65■□□□□ 0.9
TM4SF1P30408 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.65■□□□□ 0.9
TM4SF1P30408 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF1P30408 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
TM4SF1P30408 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TM4SF1P30408 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TM4SF1P30408 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TM4SF1P30408 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TM4SF1P30408 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF1P30408 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.64■□□□□ 0.89
TM4SF1P30408 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF1P30408 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TM4SF1P30408 AC098850.1-201ENST00000419919 790 ntBASIC20.64■□□□□ 0.89
TM4SF1P30408 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF1P30408 TTTY23B-201ENST00000442790 549 ntBASIC20.64■□□□□ 0.89
TM4SF1P30408 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.64■□□□□ 0.89
TM4SF1P30408 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.64■□□□□ 0.89
TM4SF1P30408 AL589987.1-201ENST00000453380 819 ntBASIC20.64■□□□□ 0.89
TM4SF1P30408 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.64■□□□□ 0.89
TM4SF1P30408 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.64■□□□□ 0.89
TM4SF1P30408 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.64■□□□□ 0.89
TM4SF1P30408 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TM4SF1P30408 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.64■□□□□ 0.89
TM4SF1P30408 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.64■□□□□ 0.89
TM4SF1P30408 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF1P30408 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TM4SF1P30408 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF1P30408 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF1P30408 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF1P30408 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF1P30408 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.64■□□□□ 0.89
TM4SF1P30408 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF1P30408 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.63■□□□□ 0.89
TM4SF1P30408 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF1P30408 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF1P30408 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TM4SF1P30408 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF1P30408 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TM4SF1P30408 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF1P30408 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF1P30408 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms