Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.71■□□□□ 0.59
CTGFP29279 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTGFP29279 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTGFP29279 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTGFP29279 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.71■□□□□ 0.59
CTGFP29279 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTGFP29279 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CTGFP29279 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CTGFP29279 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
CTGFP29279 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTGFP29279 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTGFP29279 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTGFP29279 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTGFP29279 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.7■□□□□ 0.58
CTGFP29279 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTGFP29279 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CTGFP29279 MEP1AP4-201ENST00000423244 1087 ntBASIC18.7■□□□□ 0.58
CTGFP29279 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.7■□□□□ 0.58
CTGFP29279 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTGFP29279 SERBP1P3-201ENST00000459980 809 ntBASIC18.7■□□□□ 0.58
CTGFP29279 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CTGFP29279 AC104989.1-201ENST00000519711 778 ntBASIC18.7■□□□□ 0.58
CTGFP29279 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.7■□□□□ 0.58
CTGFP29279 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.7■□□□□ 0.58
CTGFP29279 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
CTGFP29279 AL583810.1-201ENST00000553344 1045 ntBASIC18.7■□□□□ 0.58
CTGFP29279 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.7■□□□□ 0.58
CTGFP29279 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.7■□□□□ 0.58
CTGFP29279 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.7■□□□□ 0.58
CTGFP29279 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.7■□□□□ 0.58
CTGFP29279 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.7■□□□□ 0.58
CTGFP29279 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CTGFP29279 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.7■□□□□ 0.58
CTGFP29279 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.7■□□□□ 0.58
CTGFP29279 MIR6869-201ENST00000619434 62 ntBASIC18.7■□□□□ 0.58
CTGFP29279 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTGFP29279 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTGFP29279 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTGFP29279 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.7■□□□□ 0.58
CTGFP29279 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTGFP29279 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTGFP29279 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTGFP29279 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTGFP29279 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.69■□□□□ 0.58
CTGFP29279 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTGFP29279 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.69■□□□□ 0.58
CTGFP29279 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CTGFP29279 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTGFP29279 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTGFP29279 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CTGFP29279 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTGFP29279 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTGFP29279 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.69■□□□□ 0.58
CTGFP29279 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTGFP29279 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CTGFP29279 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.69■□□□□ 0.58
CTGFP29279 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.69■□□□□ 0.58
CTGFP29279 USP32P1-208ENST00000506594 1164 ntBASIC18.69■□□□□ 0.58
CTGFP29279 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.69■□□□□ 0.58
CTGFP29279 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTGFP29279 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.69■□□□□ 0.58
CTGFP29279 AC061975.2-201ENST00000581722 295 ntBASIC18.69■□□□□ 0.58
CTGFP29279 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.69■□□□□ 0.58
CTGFP29279 TMEM261P1-201ENST00000604899 340 ntBASIC18.69■□□□□ 0.58
CTGFP29279 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.69■□□□□ 0.58
CTGFP29279 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.69■□□□□ 0.58
CTGFP29279 AL033527.5-201ENST00000641382 801 ntBASIC18.69■□□□□ 0.58
CTGFP29279 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTGFP29279 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CTGFP29279 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTGFP29279 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CTGFP29279 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTGFP29279 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTGFP29279 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTGFP29279 AC093525.8-201ENST00000624099 1342 ntBASIC18.69■□□□□ 0.58
CTGFP29279 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.69■□□□□ 0.58
CTGFP29279 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.69■□□□□ 0.58
CTGFP29279 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTGFP29279 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CTGFP29279 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTGFP29279 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CTGFP29279 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.68■□□□□ 0.58
CTGFP29279 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTGFP29279 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTGFP29279 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTGFP29279 AC016396.2-201ENST00000562575 1417 ntBASIC18.68■□□□□ 0.58
CTGFP29279 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTGFP29279 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTGFP29279 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTGFP29279 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CTGFP29279 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.68■□□□□ 0.58
CTGFP29279 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTGFP29279 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.68■□□□□ 0.58
CTGFP29279 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTGFP29279 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.68■□□□□ 0.58
CTGFP29279 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.68■□□□□ 0.58
CTGFP29279 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTGFP29279 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.68■□□□□ 0.58
CTGFP29279 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTGFP29279 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms