Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMLP26374 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CHMLP26374 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHMLP26374 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHMLP26374 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMLP26374 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHMLP26374 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
CHMLP26374 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.27■□□□□ 0.84
CHMLP26374 FAM185BP-201ENST00000443595 716 ntBASIC20.27■□□□□ 0.84
CHMLP26374 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CHMLP26374 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.27■□□□□ 0.84
CHMLP26374 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.27■□□□□ 0.84
CHMLP26374 AC087641.1-201ENST00000557561 1021 ntBASIC20.27■□□□□ 0.84
CHMLP26374 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMLP26374 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.27■□□□□ 0.84
CHMLP26374 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.27■□□□□ 0.84
CHMLP26374 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CHMLP26374 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CHMLP26374 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMLP26374 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMLP26374 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.27■□□□□ 0.84
CHMLP26374 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
CHMLP26374 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CHMLP26374 HLA-A-201ENST00000376802 1334 ntBASIC20.27■□□□□ 0.83
CHMLP26374 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.27■□□□□ 0.83
CHMLP26374 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CHMLP26374 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.26■□□□□ 0.83
CHMLP26374 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMLP26374 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMLP26374 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.26■□□□□ 0.83
CHMLP26374 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMLP26374 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMLP26374 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMLP26374 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
CHMLP26374 AC108751.1-201ENST00000490852 363 ntBASIC20.26■□□□□ 0.83
CHMLP26374 IGHV3-22-201ENST00000520721 359 ntBASIC20.26■□□□□ 0.83
CHMLP26374 UNC93B6-202ENST00000528242 690 ntBASIC20.26■□□□□ 0.83
CHMLP26374 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.26■□□□□ 0.83
CHMLP26374 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.26■□□□□ 0.83
CHMLP26374 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.26■□□□□ 0.83
CHMLP26374 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.26■□□□□ 0.83
CHMLP26374 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.26■□□□□ 0.83
CHMLP26374 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CHMLP26374 AC010654.1-201ENST00000615722 808 ntBASIC20.26■□□□□ 0.83
CHMLP26374 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CHMLP26374 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMLP26374 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMLP26374 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMLP26374 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMLP26374 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMLP26374 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMLP26374 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMLP26374 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CHMLP26374 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
CHMLP26374 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.26■□□□□ 0.83
CHMLP26374 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMLP26374 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CHMLP26374 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMLP26374 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CHMLP26374 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CHMLP26374 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMLP26374 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMLP26374 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMLP26374 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CHMLP26374 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CHMLP26374 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMLP26374 CYP2T1P-202ENST00000641596 2535 ntBASIC20.25■□□□□ 0.83
CHMLP26374 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMLP26374 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMLP26374 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMLP26374 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMLP26374 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMLP26374 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CHMLP26374 HCG4-201ENST00000418983 998 ntBASIC20.25■□□□□ 0.83
CHMLP26374 PRSS29P-201ENST00000440800 595 ntBASIC20.25■□□□□ 0.83
CHMLP26374 AC009947.1-201ENST00000444350 727 ntBASIC20.25■□□□□ 0.83
CHMLP26374 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMLP26374 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMLP26374 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMLP26374 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.25■□□□□ 0.83
CHMLP26374 AP001005.1-201ENST00000571755 1248 ntBASIC20.25■□□□□ 0.83
CHMLP26374 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CHMLP26374 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CHMLP26374 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMLP26374 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMLP26374 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
CHMLP26374 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CHMLP26374 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
CHMLP26374 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMLP26374 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.24■□□□□ 0.83
CHMLP26374 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMLP26374 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMLP26374 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMLP26374 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMLP26374 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMLP26374 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMLP26374 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMLP26374 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMLP26374 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
CHMLP26374 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms