Protein–RNA interactions for Protein: P25105

PTAFR, Platelet-activating factor receptor, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTAFRP25105 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTAFRP25105 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
PTAFRP25105 AL355312.1-201ENST00000407115 2176 ntBASIC14.92□□□□□ -0.02
PTAFRP25105 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTAFRP25105 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTAFRP25105 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTAFRP25105 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
PTAFRP25105 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTAFRP25105 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTAFRP25105 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTAFRP25105 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTAFRP25105 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTAFRP25105 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
PTAFRP25105 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.91□□□□□ -0.02
PTAFRP25105 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
PTAFRP25105 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.91□□□□□ -0.02
PTAFRP25105 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.91□□□□□ -0.02
PTAFRP25105 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.91□□□□□ -0.02
PTAFRP25105 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.91□□□□□ -0.02
PTAFRP25105 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
PTAFRP25105 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.91□□□□□ -0.02
PTAFRP25105 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
PTAFRP25105 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.91□□□□□ -0.02
PTAFRP25105 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.91□□□□□ -0.02
PTAFRP25105 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PTAFRP25105 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTAFRP25105 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PTAFRP25105 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.9□□□□□ -0.02
PTAFRP25105 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.9□□□□□ -0.02
PTAFRP25105 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PTAFRP25105 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.9□□□□□ -0.02
PTAFRP25105 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
PTAFRP25105 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PTAFRP25105 MIR1233-2-201ENST00000408138 82 ntBASIC14.9□□□□□ -0.02
PTAFRP25105 MIR1233-1-201ENST00000408722 82 ntBASIC14.9□□□□□ -0.02
PTAFRP25105 AC004832.2-201ENST00000426397 482 ntBASIC14.9□□□□□ -0.02
PTAFRP25105 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.9□□□□□ -0.02
PTAFRP25105 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.9□□□□□ -0.02
PTAFRP25105 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.9□□□□□ -0.02
PTAFRP25105 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.9□□□□□ -0.02
PTAFRP25105 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.9□□□□□ -0.02
PTAFRP25105 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
PTAFRP25105 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.9□□□□□ -0.02
PTAFRP25105 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTAFRP25105 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.9□□□□□ -0.02
PTAFRP25105 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PTAFRP25105 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.9□□□□□ -0.02
PTAFRP25105 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PTAFRP25105 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTAFRP25105 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PTAFRP25105 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PTAFRP25105 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTAFRP25105 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTAFRP25105 AL662844.4-201ENST00000606367 2838 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms