Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.38■□□□□ 0.85
KCNA3P22001 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNA3P22001 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
KCNA3P22001 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
KCNA3P22001 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNA3P22001 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
KCNA3P22001 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.37■□□□□ 0.85
KCNA3P22001 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNA3P22001 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
KCNA3P22001 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.37■□□□□ 0.85
KCNA3P22001 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.37■□□□□ 0.85
KCNA3P22001 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.37■□□□□ 0.85
KCNA3P22001 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KCNA3P22001 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
KCNA3P22001 AP000974.1-201ENST00000623909 2387 ntBASIC20.37■□□□□ 0.85
KCNA3P22001 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
KCNA3P22001 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNA3P22001 NOC2LP1-202ENST00000452600 2235 ntBASIC20.37■□□□□ 0.85
KCNA3P22001 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNA3P22001 AL355312.1-201ENST00000407115 2176 ntBASIC20.36■□□□□ 0.85
KCNA3P22001 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNA3P22001 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.36■□□□□ 0.85
KCNA3P22001 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KCNA3P22001 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.36■□□□□ 0.85
KCNA3P22001 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KCNA3P22001 AC020907.1-201ENST00000616460 1350 ntBASIC20.36■□□□□ 0.85
KCNA3P22001 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNA3P22001 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.36■□□□□ 0.85
KCNA3P22001 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNA3P22001 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
KCNA3P22001 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.36■□□□□ 0.85
KCNA3P22001 SERBP1P3-201ENST00000459980 809 ntBASIC20.36■□□□□ 0.85
KCNA3P22001 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KCNA3P22001 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
KCNA3P22001 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.36■□□□□ 0.85
KCNA3P22001 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.36■□□□□ 0.85
KCNA3P22001 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.36■□□□□ 0.85
KCNA3P22001 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.36■□□□□ 0.85
KCNA3P22001 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KCNA3P22001 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.36■□□□□ 0.85
KCNA3P22001 AC015936.2-201ENST00000593177 259 ntBASIC20.36■□□□□ 0.85
KCNA3P22001 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC20.36■□□□□ 0.85
KCNA3P22001 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNA3P22001 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
KCNA3P22001 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.36■□□□□ 0.85
KCNA3P22001 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNA3P22001 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNA3P22001 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNA3P22001 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KCNA3P22001 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.36■□□□□ 0.85
KCNA3P22001 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNA3P22001 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KCNA3P22001 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
KCNA3P22001 AL021920.2-201ENST00000624828 1351 ntBASIC20.35■□□□□ 0.85
KCNA3P22001 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNA3P22001 STX1A-203ENST00000395155 783 ntTSL 2 BASIC20.35■□□□□ 0.85
KCNA3P22001 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
KCNA3P22001 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.35■□□□□ 0.85
KCNA3P22001 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC20.35■□□□□ 0.85
KCNA3P22001 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KCNA3P22001 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC20.35■□□□□ 0.85
KCNA3P22001 TPI1-206ENST00000488464 791 ntTSL 5 BASIC20.35■□□□□ 0.85
KCNA3P22001 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
KCNA3P22001 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.35■□□□□ 0.85
KCNA3P22001 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
KCNA3P22001 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.35■□□□□ 0.85
KCNA3P22001 RN7SL219P-201ENST00000582872 296 ntBASIC20.35■□□□□ 0.85
KCNA3P22001 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC20.35■□□□□ 0.85
KCNA3P22001 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.35■□□□□ 0.85
KCNA3P22001 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.35■□□□□ 0.85
KCNA3P22001 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.35■□□□□ 0.85
KCNA3P22001 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.35■□□□□ 0.85
KCNA3P22001 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNA3P22001 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNA3P22001 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.35■□□□□ 0.85
KCNA3P22001 AC108860.2-201ENST00000562760 2183 ntBASIC20.35■□□□□ 0.85
KCNA3P22001 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
KCNA3P22001 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNA3P22001 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.35■□□□□ 0.85
KCNA3P22001 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNA3P22001 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
KCNA3P22001 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KCNA3P22001 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
KCNA3P22001 AC093525.9-201ENST00000624961 1746 ntBASIC20.34■□□□□ 0.85
KCNA3P22001 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
KCNA3P22001 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.34■□□□□ 0.85
KCNA3P22001 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KCNA3P22001 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KCNA3P22001 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.34■□□□□ 0.85
KCNA3P22001 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.34■□□□□ 0.85
KCNA3P22001 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KCNA3P22001 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KCNA3P22001 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.34■□□□□ 0.85
KCNA3P22001 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.34■□□□□ 0.85
KCNA3P22001 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KCNA3P22001 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KCNA3P22001 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
KCNA3P22001 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms