Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2B1P20020 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ATP2B1P20020 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B1P20020 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2B1P20020 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B1P20020 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B1P20020 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B1P20020 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP2B1P20020 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP2B1P20020 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B1P20020 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP2B1P20020 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B1P20020 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B1P20020 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP2B1P20020 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP2B1P20020 AP002414.1-201ENST00000391405 1147 ntBASIC19.45■□□□□ 0.7
ATP2B1P20020 MRPL3P1-201ENST00000400109 1033 ntBASIC19.45■□□□□ 0.7
ATP2B1P20020 AC018712.1-201ENST00000455767 687 ntBASIC19.45■□□□□ 0.7
ATP2B1P20020 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ATP2B1P20020 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP2B1P20020 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
ATP2B1P20020 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP2B1P20020 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B1P20020 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B1P20020 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP2B1P20020 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ATP2B1P20020 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B1P20020 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.44■□□□□ 0.7
ATP2B1P20020 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B1P20020 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B1P20020 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B1P20020 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B1P20020 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ATP2B1P20020 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ATP2B1P20020 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.44■□□□□ 0.7
ATP2B1P20020 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B1P20020 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP2B1P20020 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.44■□□□□ 0.7
ATP2B1P20020 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP2B1P20020 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.44■□□□□ 0.7
ATP2B1P20020 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.44■□□□□ 0.7
ATP2B1P20020 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ATP2B1P20020 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.44■□□□□ 0.7
ATP2B1P20020 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B1P20020 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B1P20020 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B1P20020 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B1P20020 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B1P20020 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B1P20020 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B1P20020 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B1P20020 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B1P20020 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
ATP2B1P20020 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B1P20020 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ATP2B1P20020 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ATP2B1P20020 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
ATP2B1P20020 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP2B1P20020 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2B1P20020 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.43■□□□□ 0.7
ATP2B1P20020 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP2B1P20020 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2B1P20020 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP2B1P20020 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2B1P20020 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2B1P20020 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
ATP2B1P20020 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2B1P20020 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2B1P20020 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2B1P20020 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP2B1P20020 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.43■□□□□ 0.7
ATP2B1P20020 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP2B1P20020 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.43■□□□□ 0.7
ATP2B1P20020 AC026396.1-201ENST00000419388 421 ntBASIC19.43■□□□□ 0.7
ATP2B1P20020 AC009078.2-202ENST00000463353 338 ntBASIC19.43■□□□□ 0.7
ATP2B1P20020 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.43■□□□□ 0.7
ATP2B1P20020 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.43■□□□□ 0.7
ATP2B1P20020 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP2B1P20020 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.43■□□□□ 0.7
ATP2B1P20020 AC008735.5-201ENST00000623544 497 ntBASIC19.43■□□□□ 0.7
ATP2B1P20020 FAM215A-202ENST00000632077 792 ntBASIC19.43■□□□□ 0.7
ATP2B1P20020 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.43■□□□□ 0.7
ATP2B1P20020 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATP2B1P20020 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP2B1P20020 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2B1P20020 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP2B1P20020 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP2B1P20020 AL645728.1-201ENST00000366221 2101 ntBASIC19.43■□□□□ 0.7
ATP2B1P20020 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2B1P20020 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2B1P20020 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2B1P20020 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2B1P20020 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.43■□□□□ 0.7
ATP2B1P20020 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2B1P20020 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2B1P20020 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP2B1P20020 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2B1P20020 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP2B1P20020 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2B1P20020 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms