Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A2P13942 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.24■□□□□ 0.83
COL11A2P13942 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.24■□□□□ 0.83
COL11A2P13942 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.24■□□□□ 0.83
COL11A2P13942 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.24■□□□□ 0.83
COL11A2P13942 RRP7BP-205ENST00000566851 833 ntBASIC20.24■□□□□ 0.83
COL11A2P13942 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A2P13942 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A2P13942 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.24■□□□□ 0.83
COL11A2P13942 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.24■□□□□ 0.83
COL11A2P13942 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.24■□□□□ 0.83
COL11A2P13942 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COL11A2P13942 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
COL11A2P13942 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.24■□□□□ 0.83
COL11A2P13942 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A2P13942 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A2P13942 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A2P13942 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A2P13942 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A2P13942 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A2P13942 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A2P13942 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A2P13942 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.23■□□□□ 0.83
COL11A2P13942 KRT8P39-201ENST00000396270 1433 ntBASIC20.23■□□□□ 0.83
COL11A2P13942 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
COL11A2P13942 SPDYE17-201ENST00000412399 783 ntBASIC20.23■□□□□ 0.83
COL11A2P13942 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A2P13942 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.23■□□□□ 0.83
COL11A2P13942 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A2P13942 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A2P13942 LINC02012-201ENST00000608206 1725 ntBASIC20.23■□□□□ 0.83
COL11A2P13942 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.23■□□□□ 0.83
COL11A2P13942 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.23■□□□□ 0.83
COL11A2P13942 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.23■□□□□ 0.83
COL11A2P13942 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A2P13942 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL11A2P13942 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.23■□□□□ 0.83
COL11A2P13942 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.23■□□□□ 0.83
COL11A2P13942 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
COL11A2P13942 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.22■□□□□ 0.83
COL11A2P13942 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL11A2P13942 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.22■□□□□ 0.83
COL11A2P13942 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL11A2P13942 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL11A2P13942 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
COL11A2P13942 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.22■□□□□ 0.83
COL11A2P13942 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.22■□□□□ 0.83
COL11A2P13942 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL11A2P13942 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL11A2P13942 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.22■□□□□ 0.83
COL11A2P13942 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL11A2P13942 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
COL11A2P13942 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.22■□□□□ 0.83
COL11A2P13942 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL11A2P13942 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
COL11A2P13942 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
COL11A2P13942 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL11A2P13942 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.22■□□□□ 0.83
COL11A2P13942 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL11A2P13942 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL11A2P13942 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL11A2P13942 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL11A2P13942 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.22■□□□□ 0.83
COL11A2P13942 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.22■□□□□ 0.83
COL11A2P13942 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL11A2P13942 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL11A2P13942 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.22■□□□□ 0.83
COL11A2P13942 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.22■□□□□ 0.83
COL11A2P13942 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.22■□□□□ 0.83
COL11A2P13942 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.22■□□□□ 0.83
COL11A2P13942 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.22■□□□□ 0.83
COL11A2P13942 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL11A2P13942 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.21■□□□□ 0.83
COL11A2P13942 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL11A2P13942 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
COL11A2P13942 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL11A2P13942 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.21■□□□□ 0.83
COL11A2P13942 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.21■□□□□ 0.83
COL11A2P13942 AC018665.1-201ENST00000622927 1362 ntBASIC20.21■□□□□ 0.83
COL11A2P13942 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL11A2P13942 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL11A2P13942 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.21■□□□□ 0.83
COL11A2P13942 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.21■□□□□ 0.83
COL11A2P13942 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL11A2P13942 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL11A2P13942 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC20.21■□□□□ 0.83
COL11A2P13942 AC025048.3-201ENST00000590609 569 ntBASIC20.21■□□□□ 0.83
COL11A2P13942 AC005702.4-201ENST00000618393 416 ntBASIC20.21■□□□□ 0.83
COL11A2P13942 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL11A2P13942 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
COL11A2P13942 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL11A2P13942 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL11A2P13942 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL11A2P13942 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
COL11A2P13942 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.2■□□□□ 0.83
COL11A2P13942 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
COL11A2P13942 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL11A2P13942 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
COL11A2P13942 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL11A2P13942 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms