Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BMP3P12645 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BMP3P12645 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
BMP3P12645 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
BMP3P12645 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
BMP3P12645 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BMP3P12645 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.35■□□□□ 0.69
BMP3P12645 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BMP3P12645 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BMP3P12645 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BMP3P12645 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BMP3P12645 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BMP3P12645 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BMP3P12645 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.34■□□□□ 0.69
BMP3P12645 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.34■□□□□ 0.69
BMP3P12645 AC069262.1-201ENST00000539058 672 ntBASIC19.34■□□□□ 0.69
BMP3P12645 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BMP3P12645 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.34■□□□□ 0.69
BMP3P12645 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.34■□□□□ 0.69
BMP3P12645 AC026150.2-201ENST00000564693 1156 ntBASIC19.34■□□□□ 0.69
BMP3P12645 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BMP3P12645 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.34■□□□□ 0.69
BMP3P12645 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.34■□□□□ 0.69
BMP3P12645 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BMP3P12645 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BMP3P12645 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BMP3P12645 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
BMP3P12645 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BMP3P12645 SNX33P1-201ENST00000592116 1762 ntBASIC19.34■□□□□ 0.69
BMP3P12645 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BMP3P12645 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BMP3P12645 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.33■□□□□ 0.69
BMP3P12645 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
BMP3P12645 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
BMP3P12645 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.33■□□□□ 0.69
BMP3P12645 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
BMP3P12645 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
BMP3P12645 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.33■□□□□ 0.69
BMP3P12645 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP3P12645 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP3P12645 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BMP3P12645 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.33■□□□□ 0.68
BMP3P12645 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.33■□□□□ 0.68
BMP3P12645 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.33■□□□□ 0.68
BMP3P12645 SPDYE14P-201ENST00000442619 822 ntBASIC19.33■□□□□ 0.68
BMP3P12645 CNN2P2-201ENST00000443536 909 ntBASIC19.33■□□□□ 0.68
BMP3P12645 CNN2P3-201ENST00000450201 906 ntBASIC19.33■□□□□ 0.68
BMP3P12645 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.33■□□□□ 0.68
BMP3P12645 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.33■□□□□ 0.68
BMP3P12645 AC067863.1-201ENST00000494933 530 ntBASIC19.33■□□□□ 0.68
BMP3P12645 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.33■□□□□ 0.68
BMP3P12645 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
BMP3P12645 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP3P12645 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.33■□□□□ 0.68
BMP3P12645 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.33■□□□□ 0.68
BMP3P12645 AL136317.3-201ENST00000618497 906 ntBASIC19.33■□□□□ 0.68
BMP3P12645 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.33■□□□□ 0.68
BMP3P12645 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.33■□□□□ 0.68
BMP3P12645 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP3P12645 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP3P12645 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.33■□□□□ 0.68
BMP3P12645 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.33■□□□□ 0.68
BMP3P12645 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP3P12645 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP3P12645 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BMP3P12645 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP3P12645 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.33■□□□□ 0.68
BMP3P12645 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.33■□□□□ 0.68
BMP3P12645 KRT8P39-201ENST00000396270 1433 ntBASIC19.33■□□□□ 0.68
BMP3P12645 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP3P12645 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP3P12645 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BMP3P12645 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
BMP3P12645 AC060834.1-201ENST00000443027 2032 ntBASIC19.32■□□□□ 0.68
BMP3P12645 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.32■□□□□ 0.68
BMP3P12645 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
BMP3P12645 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
BMP3P12645 PCDHB18P-201ENST00000524813 2368 ntBASIC19.32■□□□□ 0.68
BMP3P12645 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.32■□□□□ 0.68
BMP3P12645 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BMP3P12645 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BMP3P12645 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BMP3P12645 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BMP3P12645 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BMP3P12645 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BMP3P12645 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.32■□□□□ 0.68
BMP3P12645 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.32■□□□□ 0.68
BMP3P12645 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
BMP3P12645 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.32■□□□□ 0.68
BMP3P12645 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BMP3P12645 AL645608.8-201ENST00000606034 2086 ntBASIC19.32■□□□□ 0.68
BMP3P12645 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BMP3P12645 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
BMP3P12645 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BMP3P12645 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
BMP3P12645 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BMP3P12645 LETM1P2-201ENST00000597330 2178 ntBASIC19.32■□□□□ 0.68
BMP3P12645 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BMP3P12645 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BMP3P12645 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms