Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RARBP10826 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.78■□□□□ 0.6
RARBP10826 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RARBP10826 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RARBP10826 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RARBP10826 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.78■□□□□ 0.6
RARBP10826 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.78■□□□□ 0.6
RARBP10826 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.78■□□□□ 0.6
RARBP10826 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.78■□□□□ 0.6
RARBP10826 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.78■□□□□ 0.6
RARBP10826 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
RARBP10826 AL138828.2-201ENST00000615812 383 ntBASIC18.78■□□□□ 0.6
RARBP10826 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.78■□□□□ 0.6
RARBP10826 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.78■□□□□ 0.6
RARBP10826 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.78■□□□□ 0.6
RARBP10826 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.78■□□□□ 0.6
RARBP10826 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.78■□□□□ 0.6
RARBP10826 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RARBP10826 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.78■□□□□ 0.6
RARBP10826 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARBP10826 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RARBP10826 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RARBP10826 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARBP10826 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARBP10826 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RARBP10826 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RARBP10826 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARBP10826 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARBP10826 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
RARBP10826 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
RARBP10826 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARBP10826 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.77■□□□□ 0.6
RARBP10826 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RARBP10826 KRT18P34-201ENST00000488218 1270 ntBASIC18.77■□□□□ 0.6
RARBP10826 MEIS3P1-201ENST00000495167 958 ntBASIC18.77■□□□□ 0.6
RARBP10826 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.77■□□□□ 0.6
RARBP10826 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARBP10826 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RARBP10826 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARBP10826 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RARBP10826 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RARBP10826 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.77■□□□□ 0.59
RARBP10826 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RARBP10826 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.77■□□□□ 0.59
RARBP10826 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RARBP10826 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
RARBP10826 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.77■□□□□ 0.59
RARBP10826 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
RARBP10826 AC067852.2-201ENST00000590513 2313 ntBASIC18.77■□□□□ 0.59
RARBP10826 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RARBP10826 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARBP10826 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RARBP10826 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARBP10826 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARBP10826 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.76■□□□□ 0.59
RARBP10826 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.76■□□□□ 0.59
RARBP10826 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RARBP10826 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.76■□□□□ 0.59
RARBP10826 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.76■□□□□ 0.59
RARBP10826 COX5BP8-201ENST00000416911 349 ntBASIC18.76■□□□□ 0.59
RARBP10826 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.76■□□□□ 0.59
RARBP10826 AC007274.1-201ENST00000439805 662 ntBASIC18.76■□□□□ 0.59
RARBP10826 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.76■□□□□ 0.59
RARBP10826 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.76■□□□□ 0.59
RARBP10826 HLA-V-204ENST00000476601 1289 ntBASIC18.76■□□□□ 0.59
RARBP10826 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RARBP10826 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.76■□□□□ 0.59
RARBP10826 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RARBP10826 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.76■□□□□ 0.59
RARBP10826 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.76■□□□□ 0.59
RARBP10826 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.76■□□□□ 0.59
RARBP10826 AL359881.2-201ENST00000602973 570 ntBASIC18.76■□□□□ 0.59
RARBP10826 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARBP10826 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RARBP10826 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARBP10826 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms