Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CD48P09326 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.46■□□□□ 0.39
CD48P09326 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CD48P09326 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.46■□□□□ 0.38
CD48P09326 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CD48P09326 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD48P09326 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD48P09326 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CD48P09326 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.45■□□□□ 0.38
CD48P09326 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD48P09326 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD48P09326 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CD48P09326 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD48P09326 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.45■□□□□ 0.38
CD48P09326 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.45■□□□□ 0.38
CD48P09326 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.45■□□□□ 0.38
CD48P09326 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
CD48P09326 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.45■□□□□ 0.38
CD48P09326 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.45■□□□□ 0.38
CD48P09326 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CD48P09326 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD48P09326 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD48P09326 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.45■□□□□ 0.38
CD48P09326 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD48P09326 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.45■□□□□ 0.38
CD48P09326 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.45■□□□□ 0.38
CD48P09326 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CD48P09326 FAAHP1-202ENST00000446499 1238 ntBASIC17.45■□□□□ 0.38
CD48P09326 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.45■□□□□ 0.38
CD48P09326 RNA5SP419-201ENST00000515908 135 ntBASIC17.45■□□□□ 0.38
CD48P09326 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.45■□□□□ 0.38
CD48P09326 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.45■□□□□ 0.38
CD48P09326 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.45■□□□□ 0.38
CD48P09326 MIR1199-201ENST00000621445 119 ntBASIC17.45■□□□□ 0.38
CD48P09326 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD48P09326 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.45■□□□□ 0.38
CD48P09326 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD48P09326 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD48P09326 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.45■□□□□ 0.38
CD48P09326 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD48P09326 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CD48P09326 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.45■□□□□ 0.38
CD48P09326 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD48P09326 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD48P09326 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CD48P09326 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD48P09326 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.44■□□□□ 0.38
CD48P09326 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.44■□□□□ 0.38
CD48P09326 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD48P09326 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.44■□□□□ 0.38
CD48P09326 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.44■□□□□ 0.38
CD48P09326 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD48P09326 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD48P09326 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CD48P09326 AL031284.1-201ENST00000419297 478 ntBASIC17.44■□□□□ 0.38
CD48P09326 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CD48P09326 AC092910.1-201ENST00000482027 1129 ntBASIC17.44■□□□□ 0.38
CD48P09326 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.44■□□□□ 0.38
CD48P09326 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.44■□□□□ 0.38
CD48P09326 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
CD48P09326 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.44■□□□□ 0.38
CD48P09326 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.44■□□□□ 0.38
CD48P09326 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CD48P09326 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD48P09326 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.44■□□□□ 0.38
CD48P09326 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CD48P09326 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD48P09326 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CD48P09326 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.44■□□□□ 0.38
CD48P09326 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD48P09326 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CD48P09326 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.44■□□□□ 0.38
CD48P09326 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CD48P09326 AC131009.4-201ENST00000624048 1740 ntBASIC17.44■□□□□ 0.38
CD48P09326 AL512652.2-201ENST00000625156 1716 ntBASIC17.44■□□□□ 0.38
CD48P09326 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD48P09326 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.44■□□□□ 0.38
CD48P09326 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CD48P09326 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
CD48P09326 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.43■□□□□ 0.38
CD48P09326 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.43■□□□□ 0.38
CD48P09326 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 DOC2GP-204ENST00000639052 2548 ntBASIC17.43■□□□□ 0.38
CD48P09326 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.43■□□□□ 0.38
CD48P09326 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.43■□□□□ 0.38
CD48P09326 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
CD48P09326 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.43■□□□□ 0.38
CD48P09326 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.43■□□□□ 0.38
CD48P09326 AC009078.2-202ENST00000463353 338 ntBASIC17.43■□□□□ 0.38
CD48P09326 AC108073.2-201ENST00000464002 357 ntBASIC17.43■□□□□ 0.38
CD48P09326 HLA-J-202ENST00000469281 1241 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms