Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.2□□□□□ -0.14
CD74P04233 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.2□□□□□ -0.14
CD74P04233 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.2□□□□□ -0.14
CD74P04233 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CD74P04233 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.2□□□□□ -0.14
CD74P04233 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
CD74P04233 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.2□□□□□ -0.14
CD74P04233 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CD74P04233 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
CD74P04233 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CD74P04233 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.2□□□□□ -0.14
CD74P04233 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.2□□□□□ -0.14
CD74P04233 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.2□□□□□ -0.14
CD74P04233 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.2□□□□□ -0.14
CD74P04233 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 AL441883.1-201ENST00000566170 1045 ntBASIC14.2□□□□□ -0.14
CD74P04233 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.2□□□□□ -0.14
CD74P04233 AL353801.3-201ENST00000609898 542 ntBASIC14.2□□□□□ -0.14
CD74P04233 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.2□□□□□ -0.14
CD74P04233 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.2□□□□□ -0.14
CD74P04233 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CD74P04233 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CD74P04233 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.2□□□□□ -0.14
CD74P04233 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CD74P04233 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.2□□□□□ -0.14
CD74P04233 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.2□□□□□ -0.14
CD74P04233 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CD74P04233 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
CD74P04233 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CD74P04233 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD74P04233 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.19□□□□□ -0.14
CD74P04233 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.19□□□□□ -0.14
CD74P04233 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CD74P04233 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD74P04233 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
CD74P04233 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD74P04233 KRT8P49-201ENST00000604166 1432 ntBASIC14.19□□□□□ -0.14
CD74P04233 MMP23A-201ENST00000234610 1017 ntBASIC14.19□□□□□ -0.14
CD74P04233 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD74P04233 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD74P04233 AP002414.1-201ENST00000391405 1147 ntBASIC14.19□□□□□ -0.14
CD74P04233 KLF4P1-201ENST00000412782 1185 ntBASIC14.19□□□□□ -0.14
CD74P04233 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.19□□□□□ -0.14
CD74P04233 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.19□□□□□ -0.14
CD74P04233 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.19□□□□□ -0.14
CD74P04233 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.19□□□□□ -0.14
CD74P04233 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.19□□□□□ -0.14
CD74P04233 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
CD74P04233 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.19□□□□□ -0.14
CD74P04233 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.19□□□□□ -0.14
CD74P04233 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CD74P04233 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.19□□□□□ -0.14
CD74P04233 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD74P04233 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CD74P04233 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CD74P04233 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CD74P04233 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD74P04233 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.19□□□□□ -0.14
CD74P04233 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.19□□□□□ -0.14
CD74P04233 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD74P04233 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.19□□□□□ -0.14
CD74P04233 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.19□□□□□ -0.14
CD74P04233 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD74P04233 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD74P04233 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.19□□□□□ -0.14
CD74P04233 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD74P04233 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD74P04233 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
CD74P04233 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD74P04233 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.19□□□□□ -0.14
CD74P04233 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD74P04233 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.19□□□□□ -0.14
CD74P04233 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CD74P04233 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD74P04233 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.18□□□□□ -0.14
CD74P04233 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CD74P04233 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 AC073347.1-201ENST00000421633 2643 ntBASIC14.18□□□□□ -0.14
CD74P04233 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CD74P04233 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD74P04233 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms